Hs02180916_cn

• Gene Symbol: NOP56
• Assay Reference Genome Location: Chr.20:2653327 on build GRCh38
• Cytoband: 20p13

Target Gene Details

• Entrez Gene ID: 10528
• Gene Name: NOP56 ribonucleoprotein
• Gene Aliases: NOL5A, SCA36
• Location: Chr.20:2652532-2658393 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NOP56	NM_006392.3	3	271	NP_006383.2
	NR_027700.2	3	271
	AK292721.1	3	171
	BC018421.1	2	131
	BC104791.1	3	271	AAI04792.1
	BC104793.1	3	271	AAI04794.1
	BG429581.1	3	201
	BX647439.1	3	171
	BX647513.1	2	195
	DA805367.1	3	216
	Y12065.1	2	181	CAA72789.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1057464	Chr.20:2650623 - 2989686 on Build GRCh38	Gain	VPS16 SNORD56 IDH3B NOP56 SNORD110 TMEM239 C20orf141 PCED1A SNORA51 SNORD57 EBF4 MIR1292 PTPRA SNORD86 CPXM1
nsv470535	Chr.20:1948896 - 2780594 on Build GRCh38	Gain	SNORD56 PDYN SNORD119 IDH3B LOC388780 NOP56 SNORD110 ZNF343 LOC727993 TGM6 SNORA51 TGM3 STK35 SNORD57 SNRPB TMC2 EBF4 MIR1292 SNORD86
esv3644998	Chr.20:2148722 - 2690694 on Build GRCh38	Gain	SNORD56 SNORD119 IDH3B LOC388780 NOP56 SNORD110 ZNF343 TGM6 SNORA51 TGM3 SNORD57 SNRPB TMC2 MIR1292 SNORD86

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

rRNA modification
rRNA processing
cell-cell adhesion

Function(s)

RNA binding
protein binding
snoRNA binding
poly(A) RNA binding
cadherin binding involved in cell-cell adhesion
histone methyltransferase binding