Hs02181415_cn

• Gene Symbol: HOXA13
• Assay Reference Genome Location: Chr.7:27200080 on build GRCh38
• Cytoband: 7p15.2

Target Gene Details

• Entrez Gene ID: 3209
• Gene Name: homeobox A13
• Gene Aliases: HOX1, HOX1J
• Location: Chr.7:27196880-27200106 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HOXA13	NM_000522.4			NP_000513.2
	BC075791.1			AAH75791.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv606469	Chr.7:27181212 - 27207660 on Build GRCh38	Loss	HOXA11 HOXA11-AS HOTTIP HOXA13
dgv1094n67	Chr.7:27079675 - 27255391 on Build GRCh38	Gain	HOXA10-HOXA9 HOXA6 HOXA10-AS HOXA1 EVX1-AS HOXA9 HOXA5 HOTAIRM1 HOXA-AS2 MIR196B HOXA13 HOXA-AS3 HOXA11 HOXA10 HOXA4 HOXA3 HOXA2 HOXA11-AS HOXA7 EVX1 HOTTIP
nsv1075019	Chr.7:27199680 - 27200281 on Build GRCh38	Deletion	HOXA13
nsv5675	Chr.7:27178983 - 27213211 on Build GRCh38	Insertion	HOXA11 HOXA10 HOXA10-HOXA9 HOXA11-AS HOTTIP HOXA13
nsv824042	Chr.7:27129612 - 27207613 on Build GRCh38	Gain	HOXA10-HOXA9 HOXA6 HOXA10-AS HOXA9 HOXA5 MIR196B HOXA13 HOXA-AS3 HOXA11 HOXA10 HOXA4 HOXA3 HOXA11-AS HOXA7 HOTTIP
nsv606468	Chr.7:27162670 - 27241685 on Build GRCh38	Loss	HOXA11 HOXA10 HOXA10-HOXA9 HOXA10-AS EVX1-AS HOXA9 HOXA11-AS HOTTIP MIR196B HOXA13

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

skeletal system development
transcription, DNA-templated
regulation of transcription, DNA-templated

Function(s)

DNA binding
sequence-specific DNA binding