Hs02186709_cn

• Gene Symbol: MED18
• Assay Reference Genome Location: Chr.1:28330770 on build GRCh38
• Cytoband: 1p35.3

Target Gene Details

• Entrez Gene ID: 54797
• Gene Name: mediator complex subunit 18
• Gene Aliases: p28b
• Location: Chr.1:28329002-28335967 on Build GRCh38
• Assay Gene Location: Overlaps Exon 3 - Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MED18	NM_001127350.1			NP_001120822.1
	NM_017638.2			NP_060108.2
	XM_005245914.4			XP_005245971.1
	AB107222.1			BAD06869.1
	AK000052.1			BAA90910.1
	AK296130.1
	BC002694.2			AAH02694.1
	BG752399.1
	DA090416.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv545916	Chr.1:28208722 - 28624350 on Build GRCh38	Gain	TRNAU1AP SNORA44 SNORA73A SNORA61 DNAJC8 SESN2 RAB42 LOC105376896 SNORA73B SNHG3 MED18 RCC1 SNHG12 ATPIF1 SNORD99 PHACTR4 SNORA16A TAF12

More Information

Additional Information:

For this assay, SNP(s) [rs76452396] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein, nucleic acid metabolism protein, general transcription factor

Gene Ontology Categories:

Process(es)

regulation of transcription from RNA polymerase II promoter
termination of RNA polymerase II transcription

Function(s)

RNA polymerase II transcription cofactor activity
protein binding