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Gene Symbol
FSCN2
Assay Reference Genome
Location

Chr.17:81536170 on build GRCh38
Cytoband
17q25.3
Assay ID Hs02202143_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 25794

Gene Name:

 fascin actin-bundling protein 2, retinal

Gene Aliases:

 RFSN, RP30

Location:

 Chr.17:81513019-81537130 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FSCN2 NM_001077182.2 NP_001070650.1
NM_012418.3 NP_036550.1
XM_011524587.2 XP_011522889.1
XM_011524590.2 XP_011522892.1
AF030165.1 AAB86481.1
AI189621.1
BC126295.1
BC130330.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv576181 Chr.17:81526313 - 81537989 on Build GRCh38 Loss FSCN2
esv26223 Chr.17:80659041 - 81736487 on Build GRCh38 Gain+Loss ARL16 LOC105371921 SLC25A10 LOC105371925 MIR657 PDE6G LOC107985021 ACTG1 LOC100130370 MIR4740 OXLD1 NPLOC4 CHMP6 MIR6786 LOC101928855 MRPL12 MIR338 C17orf89 MIR3186 LOC107985022 RPTOR CCDC137 TEPSIN AATK LOC100129503 FAAP100 CEP131 AATK-AS1 SLC38A10 BAIAP2 TMEM105 FSCN2 BAIAP2-AS1 BAHCC1 MIR3065 HGS MIR1250 LOC400627 LINC00482 TSPAN10
nsv2164 Chr.17:81528220 - 81566024 on Build GRCh38 Insertion FSCN2 FAAP100 NPLOC4
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain ARL16 SLC25A10 LOC105371925 ANAPC11 PDE6G MIR4525 CD7 DUS1L ACTG1 DCXR CSNK1D LOC100130370 MIR4740 SECTM1 OXLD1 NPLOC4 RAB40B MAFG-AS1 MYADML2 MIR6786 TBCD MRPL12 ZNF750 PPP1R27 FN3KRP C17orf89 SIRT7 CCDC137 TEPSIN PCYT2 UTS2R SNORD134 AATK SLC16A3 NPB LOC101929511 ALYREF NARF SLC38A10 C17orf62 PYCR1 NOTUM B3GNTL1 RAC3 LOC105371944 OGFOD3 HGS FOXK2 LOC105376790 RFNG FASN MCRIP1 CCDC57 GPS1 TEX19 ARHGDIA P4HB STRA13 GCGR MIR3186 MIR6787 LRRC45 LOC105376791 FAAP100 CEP131 AATK-AS1 ASPSCR1 TMEM105 FN3K FSCN2 BAHCC1 LOC101929552 WDR45B LINC00482 HEXDC TSPAN10 MAFG
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss ARL16 SLC25A10 ANAPC11 PDE6G DUS1L ARHGDIA DCXR P4HB OXLD1 NPLOC4 MAFG-AS1 MYADML2 MIR6786 MRPL12 PPP1R27 STRA13 SIRT7 GCGR LRRC45 CCDC137 PCYT2 FAAP100 NPB ALYREF ASPSCR1 PYCR1 NOTUM FSCN2 RAC3 HGS RFNG TSPAN10 MAFG MCRIP1 GPS1
nsv833568 Chr.17:81491932 - 81635795 on Build GRCh38 Loss FSCN2 FAAP100 NPLOC4 ACTG1
nsv952389 Chr.17:81137501 - 81593774 on Build GRCh38 Deletion TEPSIN AATK FAAP100 CEP131 LOC105371925 AATK-AS1 SLC38A10 ACTG1 TMEM105 LOC100130370 MIR4740 FSCN2 BAHCC1 NPLOC4 C17orf89 LINC00482 MIR3186

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More Information


Additional Information:

For this assay, SNP(s) [rs73369203] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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