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See other TAF1C CNV Assays ›
Gene Symbol
TAF1C
Assay Reference Genome
Location

Chr.16:84181620 on build GRCh38
Cytoband
16q24.1
Assay ID Hs02251621_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9013

Gene Name:

 TATA-box binding protein associated factor, RNA polymerase I subunit C

Gene Aliases:

 MGC:39976, SL1, TAFI110, TAFI95

Location:

 Chr.16:84177847-84187070 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAF1C NM_001243156.1 NP_001230085.1
NM_001243157.1 NP_001230086.1
NM_001243158.1 NP_001230087.1
NM_001243159.1 NP_001230088.1
NM_001243160.1 NP_001230089.1
NM_005679.3 NP_005670.3
NM_139353.2 NP_647610.2
XM_005256226.3 XP_005256283.1
XM_005256227.3 XP_005256284.1
XM_006721325.3 XP_006721388.1
XM_006721326.3 XP_006721389.1
XM_017023845.1 XP_016879334.1
XM_017023846.1 XP_016879335.1
XM_017023847.1 XP_016879336.1
XM_017023848.1 XP_016879337.1
AB209594.1 BAD92831.1
AK097031.1
AK299060.1
AK299347.1
AK304261.1
AK304739.1
AK315982.1
BC028131.1 AAH28131.1
L39059.1 AAA62861.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639413 Chr.16:84172318 - 84253359 on Build GRCh38 Loss KCNG4 TAF1C ADAD2 DNAAF1
nsv833309 Chr.16:84076867 - 84248591 on Build GRCh38 Loss LOC729887 KCNG4 TAF1C HSDL1 MBTPS1 ADAD2 DNAAF1
nsv1065790 Chr.16:83830329 - 84243597 on Build GRCh38 Loss LOC729887 LOC105371371 KCNG4 TAF1C HSDL1 MLYCD OSGIN1 MBTPS1 ADAD2 SLC38A8 DNAAF1 NECAB2
esv2761930 Chr.16:84007420 - 84312461 on Build GRCh38 Gain LOC729887 LOC105376777 KCNG4 TAF1C HSDL1 MBTPS1 ADAD2 WFDC1 SLC38A8 DNAAF1
nsv523437 Chr.16:84176132 - 84196770 on Build GRCh38 Loss TAF1C ADAD2 DNAAF1
nsv573423 Chr.16:84179104 - 84190716 on Build GRCh38 Loss TAF1C
esv3639414 Chr.16:84176251 - 84352273 on Build GRCh38 Loss LOC105376777 KCNG4 TAF1C ADAD2 WFDC1 DNAAF1
esv3639412 Chr.16:84170074 - 84221406 on Build GRCh38 Loss KCNG4 TAF1C ADAD2 DNAAF1
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain CRISPLD2 USP10 MIR6774 EMC8 DNAAF1 LOC101928614 KCNG4 TAF1C LOC102724344 KLHL36 IRF8 FOXC2-AS1 COTL1 FOXF1 ADAD2 LINC00311 LINC00917 KIAA0513 LOC400548 GSE1 COX4I1 ZDHHC7 LOC146513 FOXC2 LOC105371374 FENDRR FOXL1 LOC101928474 MIR5093 LINC01081 LOC105376777 FLJ30679 ATP2C2 WFDC1 TLDC1 LOC101928557 FAM92B MIR1910 MTHFSD GINS2 LOC440390 C16orf74 LINC01082
nsv1059227 Chr.16:84029323 - 84233403 on Build GRCh38 Loss LOC729887 KCNG4 TAF1C HSDL1 MBTPS1 ADAD2 SLC38A8 DNAAF1

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