Hs02257590_cn

• Gene Symbol: TNFAIP1
• Assay Reference Genome Location: Chr.17:28341258 on build GRCh38
• Cytoband: 17q11.2

Target Gene Details

• Entrez Gene ID: 7126
• Gene Name: TNF alpha induced protein 1
• Gene Aliases: B12, B61, BTBD34, EDP1, hBACURD2
• Location: Chr.17:28335522-28347009 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TNFAIP1	NM_021137.4			NP_066960.1
	XM_017024993.1			XP_016880482.1
	AK300584.1
	AK312387.1
	BC001643.2			AAH01643.1
	BC001949.1			AAH01949.1
	BT020121.1			AAV38924.1
	CR456819.1			CAG33100.1
	M80783.1			AAA58385.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv2017	Chr.17:28325611 - 28357716 on Build GRCh38	Insertion	POLDIP2 TMEM97 IFT20 TMEM199 TNFAIP1
nsv519388	Chr.17:28303453 - 28379927 on Build GRCh38	Loss	SARM1 SEBOX KRT18P55 VTN POLDIP2 TMEM97 IFT20 TMEM199 MIR4723 TNFAIP1
nsv574653	Chr.17:28227749 - 28501479 on Build GRCh38	Gain	LOC105371930 KRT18P55 IFT20 TMEM199 MIR4723 LOC105371712 SARM1 SEBOX LOC101926984 SLC13A2 RPS7P1 VTN POLDIP2 TMEM97 PPY2P SLC46A1 PYY2 TNFAIP1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

DNA replication
apoptotic process
immune response
embryo development
cell migration
protein ubiquitination
negative regulation of Rho protein signal transduction
stress fiber assembly
proteasome-mediated ubiquitin-dependent protein catabolic process
positive regulation of DNA replication
protein homooligomerization

Function(s)

ubiquitin-protein transferase activity
protein binding
GTP-Rho binding
protein domain specific binding