Hs02275868_cn

• Gene Symbol: C16orf59
• Assay Reference Genome Location: Chr.16:2460655 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 80178
• Gene Name: chromosome 16 open reading frame 59
• Gene Aliases: -
• Location: Chr.16:2460111-2464963 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C16orf59	NM_025108.2			NP_079384.2
	XM_011522667.1			XP_011520969.1
	AK023971.1			BAB14745.1
	AK093788.1
	AK128408.1
	AK301929.1
	AL559561.3
	BC018719.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv827513	Chr.16:2457672 - 2462460 on Build GRCh38	Gain	CCNF C16orf59
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	LOC105371049 SNORD60 MEIOB LOC105371038 TMEM204 LMF1-AS1 CCDC78 LOC100134368 CCDC154 GNPTG RNPS1 CCNF RHBDL1 MIR5587 MSRB1 SNORA10 NHLRC4 TBC1D24 TBL3 LOC652276 LOC729652 PIGQ IGFALS ERVK13-1 NOXO1 CEMP1 LOC105371047 MIR1225 TRAF7 RPS2 NARFL C16orf59 HN1L EME2 MIR3177 METRN FLJ42627 RPUSD1 TPSG1 LOC105371045 NUBP2 RGS11 NPRL3 ARHGDIG STUB1 PTX4 RPL23AP5 LOC101929280 LOC106660606 LOC105371046 PGP TMEM8A RHBDF1 JMJD8 MIR6859-4 DDX11L10 CACNA1H WDR90 TPSD1 C16orf91 NTN3 LOC107984876 SPSB3 TPSB2 MIR3178 MIR662 SNHG19 PRR35 PRSS27 FBXL16 CRAMP1 FAM234A TELO2 PDIA2 SNHG9 RPL3L MIR6767 AMDHD2 CAPN15 ATP6V0C NME4 FAHD1 MLST8 RNF151 HBZ PRSS29P RAB40C E4F1 C1QTNF8 MIR6768 MIR4717 PRR25 SSTR5 MCRIP2 UNKL PDPK1 IFT140 DNASE1L2 MIR6511B1 PKD1 POLR3K MRPL28 HBM SNORA64 NTHL1 LOC107987233 MAPK8IP3 KCTD5 LUC7L MIR3176 WASIR2 SSTR5-AS1 GNG13 BAIAP3 SNRNP25 LMF1 LOC105371184 MIR4516 MPG NME3 GFER CHTF18 HAGHL HBQ1 ECI1 UBE2I SYNGR3 CASKIN1 NPW SOX8 WFIKKN1 NDUFB10 RAB11FIP3 ABCA17P SLC9A3R2 HS3ST6 ABCA3 LINC00254 HBA2 HBA1 SNORA78 TSR3 ZNF598 RAB26 METTL26 MSLN AXIN1 MRPS34 CLCN7 BRICD5 MIR940 TSC2 HAGH WDR24 DECR2 LINC00235 TPSAB1 RHOT2 MIR3180-5 MIR3677 FAM173A LOC100287175
nsv952903	Chr.16:2423400 - 2476599 on Build GRCh38	Deletion	ABCA17P NTN3 TBC1D24 MIR6768 MIR6767 LOC729652 CCNF C16orf59
nsv1052260	Chr.16:2074546 - 2629655 on Build GRCh38	Gain	LOC105371049 MLST8 SNORD60 E4F1 CASKIN1 MIR6768 MIR4717 RNPS1 CCNF PDPK1 ABCA17P LOC106660606 PGP DNASE1L2 ABCA3 MIR6511B1 TBC1D24 PKD1 LOC652276 LOC729652 RAB26 NTN3 CEMP1 MIR3178 SNHG19 MIR1225 TRAF7 BRICD5 MIR940 C16orf59 TSC2 MIR4516 MIR3180-5 MIR3677 MIR6767 AMDHD2 ATP6V0C ECI1
nsv833121	Chr.16:2360975 - 2518228 on Build GRCh38	Loss	ABCA17P NTN3 TBC1D24 MIR6768 MIR6767 LOC729652 ATP6V0C CCNF C16orf59

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding