Hs02290979_cn

• Gene Symbol: PCOLCE
• Assay Reference Genome Location: Chr.7:100602562 on build GRCh38
• Cytoband: 7q22.1

Target Gene Details

• Entrez Gene ID: 5118
• Gene Name: procollagen C-endopeptidase enhancer
• Gene Aliases: PCPE, PCPE-1, PCPE1
• Location: Chr.7:100602259-100608175 on Build GRCh38
• Assay Gene Location: Overlaps Exon 1 - Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCOLCE	NM_002593.3			NP_002584.2
	AB008549.1			BAA23281.1
	AK298364.1
	AK313748.1
	BC000574.2			AAH00574.1
	BC033205.1			AAH33205.1
	BI837971.1
	L33799.1			AAA61949.1

Target Gene Details

• Entrez Gene ID: 100129845
• Gene Name: PCOLCE antisense RNA 1
• Gene Aliases: -
• Location: Chr.7:100589401-100604038 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCOLCE-AS1	NR_038910.1	2	806
	AK097705.1	2	806
	AK298216.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2659884	Chr.7:100600622 - 100605969 on Build GRCh38	Deletion	FBXO24 PCOLCE PCOLCE-AS1
esv2734888	Chr.7:99975623 - 101290285 on Build GRCh38	Deletion	C7orf61 MBLAC1 CLDN15 MEPCE AZGP1 NYAP1 MCM7 ZASP AP1S1 UFSP1 GNB2 MUC3A MIR4653 AP4M1 GAL3ST4 PILRB PILRA FIS1 MIR6840 MIR6875 TRIM56 ACHE ZKSCAN1 SERPINE1 SPDYE3 AZGP1P1 ZNHIT1 GIGYF1 ACTL6B PVRIG PPP1R35 PCOLCE MUC12 TRIP6 MOGAT3 TAF6 LAMTOR4 PLOD3 SRRT LOC105375429 SAP25 AGFG2 PVRIG2P CNPY4 MUC17 TSC22D4 STAG3L5P-PVRIG2P-PILRB FBXO24 TFR2 STAG3L5P STAG3 NAT16 PCOLCE-AS1 C7orf43 ZSCAN21 PMS2P1 MIR4658 EPO EPHB4 MIR93 GPC2 ZAN COPS6 ZNF3 VGF ZCWPW1 GATS MOSPD3 MIR25 LRCH4 SLC12A9 LOC102724094 POP7 MIR106B
nsv951386	Chr.7:100566478 - 100682977 on Build GRCh38	Deletion	LOC105375429 SAP25 AGFG2 ZASP GIGYF1 ACTL6B FBXO24 PCOLCE GNB2 MOSPD3 TFR2 LRCH4 PCOLCE-AS1
nsv831072	Chr.7:100564880 - 100765212 on Build GRCh38	Loss	EPO LOC105375429 SAP25 AGFG2 ZAN ZASP GIGYF1 ACTL6B FBXO24 PCOLCE GNB2 MOSPD3 TFR2 LRCH4 POP7 PCOLCE-AS1
nsv5868	Chr.7:100572375 - 100617023 on Build GRCh38	Deletion	ZASP FBXO24 PCOLCE MOSPD3 LRCH4 SAP25 PCOLCE-AS1

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Process(es)

proteolysis
multicellular organism development
positive regulation of peptidase activity

Function(s)

protein binding
collagen binding
heparin binding
peptidase activator activity