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See other PAFAH1B3 CNV Assays ›
Gene Symbol
PAFAH1B3
Assay Reference Genome
Location

Chr.19:42297254 on build GRCh38
Cytoband
19q13.2
Assay ID Hs02292534_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5050

Gene Name:

 platelet activating factor acetylhydrolase 1b catalytic subunit 3

Gene Aliases:

 PAFAHG

Location:

 Chr.19:42297033-42302800 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PAFAH1B3 NM_001145939.1 6 877 NP_001139411.1
NM_001145940.1 6 638 NP_001139412.1
NM_002573.3 5 855 NP_002564.1
XM_017026846.1 5 668 XP_016882335.1
XM_017026847.1 6 833 XP_016882336.1
XM_017026848.1 6 599 XP_016882337.1
BC003016.1 5 782 AAH03016.1
BC007863.2 5 653 AAH07863.1
CR407626.1 5 520 CAG28554.1
D63391.1 5 633 BAA09706.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv520239 Chr.19:41853387 - 42426852 on Build GRCh38 Loss LOC100505622 GSK3A ERF ARHGEF1 ZNF526 LIPE GRIK5 LIPE-AS1 TMEM145 ATP1A3 PRR19 LOC100505585 CNFN POU2F2 LOC390937 CIC MEGF8 CD79A RABAC1 MIR6797 RPS19 MIR8077 ZNF574 LOC101930071 MIR4323 PAFAH1B3 DEDD2
nsv526186 Chr.19:42172329 - 42699355 on Build GRCh38 Gain CNFN POU2F2 GSK3A ERF ZNF526 LIPE CIC MEGF8 CEACAM1 MIR8077 LOC101930071 LIPE-AS1 TMEM145 CEACAM8 PRR19 CXCL17 PAFAH1B3 DEDD2
nsv1160627 Chr.19:42209979 - 42341899 on Build GRCh38 Deletion GSK3A ERF TMEM145 ZNF526 CIC MEGF8 PRR19 PAFAH1B3 DEDD2
nsv953583 Chr.19:42242549 - 42312148 on Build GRCh38 Deletion GSK3A ERF CIC PRR19 PAFAH1B3
nsv522854 Chr.19:41613927 - 42426852 on Build GRCh38 Gain LOC100505622 GSK3A ERF ARHGEF1 ZNF526 LIPE GRIK5 CEACAM3 LYPD4 DMRTC2 CEACAM7 LIPE-AS1 TMEM145 ATP1A3 PRR19 LOC100505585 CNFN POU2F2 LOC390937 CIC MEGF8 CD79A CEACAM4 RABAC1 MIR6797 RPS19 CEACAM5 MIR8077 ZNF574 LOC101930071 CEACAM6 MIR4323 PAFAH1B3 DEDD2
nsv833834 Chr.19:42232292 - 42330875 on Build GRCh38 Loss GSK3A ERF TMEM145 CIC MEGF8 PRR19 PAFAH1B3
esv2422471 Chr.19:42228989 - 43165333 on Build GRCh38 Deletion CNFN GSK3A ERF LOC100289650 PSG11 LIPE CIC PSG1 MEGF8 PSG6 CEACAM1 MIR8077 PSG2 LOC101930071 LIPE-AS1 TMEM145 PSG3 CEACAM8 PSG10P PRR19 PSG8 CXCL17 PSG7 PAFAH1B3

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