Genomic Map
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Target Gene Details
Entrez Gene ID: | 407977 |
Gene Name: | TNFSF12-TNFSF13 readthrough |
Gene Aliases: |
TWE-PRIL |
Location: |
Chr.17:7549058-7561608 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TNFSF12-TNFSF13 | NM_172089.3 | NP_742086.1 | ||
| AY081051.1 | AAL90443.1 |
Target Gene Details
Entrez Gene ID: | 8741 |
Gene Name: | tumor necrosis factor superfamily member 13 |
Gene Aliases: |
APRIL, CD256, TALL-2, TALL2, TNLG7B, TRDL-1, UNQ383/PRO715, ZTNF2 |
Location: |
Chr.17:7558292-7561608 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TNFSF13 | NM_001198622.1 | 1 | 840 | NP_001185551.1 |
| NM_001198623.1 | 1 | 840 | NP_001185552.1 | |
| NM_001198624.1 | 2 | 148 | NP_001185553.1 | |
| NM_003808.3 | 1 | 840 | NP_003799.1 | |
| NM_172087.2 | 1 | 840 | NP_742084.1 | |
| NM_172088.2 | 1 | 840 | NP_742085.1 | |
| NR_073490.2 | 1 | 840 | ||
| AF046888.1 | 1 | 373 | AAC61312.1 | |
| AF114011.1 | 1 | 373 | AAF59828.1 | |
| AF114012.1 | 1 | 289 | AAF59829.1 | |
| AF114013.1 | 1 | 345 | AAF59830.1 | |
| AF136294.1 | 1 | 92 | AAD29422.1 | |
| AF184972.1 | 1 | 217 | AAF01321.1 | |
| AI828515.1 | ||||
| AK090698.1 | 1 | 656 | ||
| AK225556.1 | 1 | 384 | ||
| AK301221.1 | 1 | 373 | ||
| AK314518.1 | 1 | 379 | ||
| AY081050.1 | 1 | 364 | AAL90442.1 | |
| AY358880.1 | 1 | 205 | AAQ89239.1 | |
| BC008042.2 | 1 | 195 | AAH08042.1 | |
| BT019561.1 | 1 | 92 | AAV38368.1 | |
| BT019562.1 | 1 | 92 | AAV38369.1 | |
| CR542040.1 | 1 | 92 | CAG46837.1 | |
| CR542073.1 | 1 | 92 | CAG46870.1 | |
| DQ149579.1 | 1 | 122 | ABA39072.1 | |
| EF211088.1 | 1 | 122 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2422288 | Chr.17:6789933 - 7646709 on Build GRCh38 | Deletion |
 TNFSF12-TNFSF13
LOC100996842
TNK1
TNFSF13
YBX2
SAT2
ACAP1
FBXO39
CLEC10A
TNFSF12
TEKT1
ALOX12
MIR195
SENP3-EIF4A1
ATP1B2
TMEM95
FXR2
NEURL4
SLC16A11
LOC107983988
ALOX12-AS1
MPDU1
RNASEK
FGF11
DVL2
POLR2A
NLGN2
ZBTB4
GABARAP
MIR497
C17orf49
BCL6B
TMEM102
TMEM256-PLSCR3
ACADVL
RNASEK-C17orf49
SNORA67
DLG4
ASGR2
SHBG
PLSCR3
SOX15
SENP3
MIR324
TMEM256
EIF5A
CLDN7
ASGR1
PHF23
CTDNEP1
CHRNB1
MIR497HG
SNORD10
CD68
C17orf74
SLC16A13
ALOX12P2
SPEM1
SLC2A4
EIF4A1
KCTD11
GPS2
SNORA48
SLC35G6
ELP5
|
| nsv574322 | Chr.17:7010333 - 7689462 on Build GRCh38 | Loss |
TNFSF12-TNFSF13
LOC100996842
TNK1
TNFSF13
YBX2
SAT2
ACAP1
CLEC10A
TNFSF12
ALOX12
MIR195
SENP3-EIF4A1
ATP1B2
TMEM95
FXR2
NEURL4
SLC16A11
LOC107983988
TP53
ALOX12-AS1
MPDU1
RNASEK
FGF11
DVL2
POLR2A
NLGN2
ZBTB4
GABARAP
MIR497
C17orf49
BCL6B
TMEM102
TMEM256-PLSCR3
ACADVL
RNASEK-C17orf49
SNORA67
DLG4
ASGR2
SHBG
PLSCR3
SOX15
SENP3
MIR324
TMEM256
EIF5A
CLDN7
ASGR1
PHF23
CTDNEP1
CHRNB1
MIR497HG
SNORD10
CD68
C17orf74
SLC16A13
WRAP53
SPEM1
SLC2A4
EIF4A1
KCTD11
GPS2
SNORA48
SLC35G6
ELP5
|
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Set Membership: |
Intragenic
Exonic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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