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Gene Symbol
NTN3
Assay Reference Genome
Location

Chr.16:2474150 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02303550_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4917

Gene Name:

 netrin 3

Gene Aliases:

 NTN2L

Location:

 Chr.16:2471499-2474145 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTN3 NM_006181.2 NP_006172.1
U86759.1 AAC51247.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4864n54 Chr.16:2462503 - 2474820 on Build GRCh38 Loss C16orf59 NTN3 MIR6768 LOC729652
esv29545 Chr.16:2471156 - 2475955 on Build GRCh38 Loss NTN3 TBC1D24
nsv571213 Chr.16:2474159 - 2475856 on Build GRCh38 Loss TBC1D24
dgv4865n54 Chr.16:2472714 - 2475915 on Build GRCh38 Gain NTN3 TBC1D24
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication BAIAP3 PKD1 NTN3 EME2 PDIA2 KCTD5 DECR2 STUB1 JMJD8 POLR3K UBE2I FAM234A LINC00235 RGS11 PTX4 IGFALS MIR6511B1 SNRNP25 DNASE1L2 PRSS29P CAPN15 NTHL1 ATP6V0C LOC107984876 MIR4717 LOC105371047 TRAF7 AXIN1 MIR3176 NARFL WDR24 GNG13 LOC100134368 HBQ1 SOX8 TSR3 NME3 SNORA10 TPSAB1 MIR4516 HN1L HBZ RPUSD1 ZNF598 PDPK1 CACNA1H FAHD1 LMF1-AS1 WFIKKN1 RPS2 RAB40C SYNGR3 MSRB1 TELO2 SLC9A3R2 MIR6768 LOC101929280 LMF1 RAB11FIP3 MIR6859-4 MIR662 MRPS34 MRPL28 CLCN7 MIR940 TBC1D24 RHOT2 FLJ42627 NPW CCDC154 CEMP1 WDR90 CCNF RAB26 LOC652276 LOC107987233 LOC105371045 GNPTG ARHGDIG FAM173A MSLN HBA2 MIR3177 MIR3677 NPRL3 PGP ECI1 LOC105371046 DDX11L10 SSTR5 LOC105371184 MLST8 SNHG19 CRAMP1 NHLRC4 LOC729652 NME4 PRR35 TPSD1 MEIOB LOC100287175 LOC105371049 ABCA17P SNORD60 METRN TPSB2 RHBDL1 HAGHL MIR5587 METTL26 C16orf91 NUBP2 RPL3L MCRIP2 CASKIN1 RNPS1 SNORA64 HBM SNORA78 LOC105371038 LOC106660606 AMDHD2 C16orf59 TBL3 RNF151 MIR3180-5 E4F1 NOXO1 RPL23AP5 C1QTNF8 RHBDF1 WASIR2 TMEM204 CHTF18 LUC7L HAGH GFER MAPK8IP3 ABCA3 SPSB3 SSTR5-AS1 HS3ST6 PIGQ FBXL16 LINC00254 MIR3178 PRSS27 ERVK13-1 BRICD5 CCDC78 UNKL IFT140 TPSG1 HBA1 SNHG9 PRR25 TMEM8A MPG NDUFB10 MIR6767 TSC2 MIR1225
dgv4866n54 Chr.16:2473273 - 2475856 on Build GRCh38 Loss NTN3 TBC1D24
nsv571205 Chr.16:2464111 - 2475856 on Build GRCh38 Gain C16orf59 NTN3 TBC1D24 LOC729652
nsv952903 Chr.16:2423400 - 2476599 on Build GRCh38 Deletion C16orf59 NTN3 ABCA17P CCNF MIR6768 MIR6767 TBC1D24 LOC729652
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain PKD1 NTN3 MIR6768 LOC105371049 MIR940 TBC1D24 ABCA17P CEMP1 SNORD60 CCNF MIR6511B1 ABCA3 DNASE1L2 RAB26 LOC652276 CASKIN1 ATP6V0C MIR3178 MIR4717 TRAF7 RNPS1 BRICD5 MIR3677 LOC106660606 AMDHD2 PGP C16orf59 ECI1 MIR4516 MIR3180-5 MLST8 E4F1 MIR6767 SNHG19 PDPK1 TSC2 MIR1225 LOC729652
nsv833121 Chr.16:2360975 - 2518228 on Build GRCh38 Loss C16orf59 NTN3 ABCA17P ATP6V0C CCNF MIR6768 MIR6767 TBC1D24 LOC729652

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More Information


Additional Information:

For this assay, SNP(s) [rs116640902,rs182426816] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

extracellular matrix protein

Gene Ontology Categories:

Function(s) Process(es)


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