Hs02309108_cn

• Gene Symbol: LOC727993
• Assay Reference Genome Location: Chr.20:1979011 on build GRCh38
• Cytoband: 20p13

Target Gene Details

• Entrez Gene ID: 727993
• Gene Name: uncharacterized LOC727993
• Gene Aliases: -
• Location: Chr.20:1947210-2007517 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC727993	NR_134520.1
	AK090681.1

Target Gene Details

• Entrez Gene ID: 5173
• Gene Name: prodynorphin
• Gene Aliases: ADCA, PENKB, SCA23
• Location: Chr.20:1978756-1994285 on Build GRCh38
• Assay Gene Location: Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PDYN	NM_001190892.1	3	2319	NP_001177821.1
	NM_001190898.2	4	2528	NP_001177827.1
	NM_001190899.2	3	2471	NP_001177828.1
	NM_001190900.1	4	2218	NP_001177829.1
	NM_024411.4	4	2531	NP_077722.1
	XM_011529244.1	3	2211	XP_011527546.1
	XM_011529245.1	3	2402	XP_011527547.1
	XM_011529246.2	3	2389	XP_011527548.1
	XM_011529247.1	3	2198	XP_011527549.1
	XM_011529248.1	3	2311	XP_011527550.1
	XM_011529249.2	3	2941	XP_011527551.1
	XM_011529250.2	3	2352	XP_011527552.1
	XM_017027878.1	3	2201	XP_016883367.1
	BC026334.1	4	2304	AAH26334.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv470535	Chr.20:1948896 - 2780594 on Build GRCh38	Gain	SNORD57 NOP56 TGM6 TGM3 SNRPB LOC727993 EBF4 SNORD86 IDH3B SNORA51 STK35 SNORD110 SNORD56 TMC2 PDYN ZNF343 SNORD119 LOC388780 MIR1292

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

neuropeptide

Gene Ontology Categories:

Process(es)

neuropeptide signaling pathway
chemical synaptic transmission
sensory perception

Function(s)

opioid peptide activity
neuropeptide hormone activity
opioid receptor binding