Hs02313076_cn

• Gene Symbol: REXO1
• Assay Reference Genome Location: Chr.19:1817745 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 57455
• Gene Name: RNA exonuclease 1 homolog
• Gene Aliases: ELOABP1, EloA-BP1, REX1, TCEB3BP1
• Location: Chr.19:1815246-1848684 on Build GRCh38
• Assay Gene Location: Overlaps Intron 12 - Exon 13

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
REXO1	NM_020695.3			NP_065746.3
	XM_011528144.1			XP_011526446.1
	XM_011528146.2			XP_011526448.1
	XM_017027028.1			XP_016882517.1
	XM_017027029.1			XP_016882518.1
	AB032964.1
	AK301030.1
	AK301729.1
	AK302362.1
	AK308256.1
	AK311255.1
	BC032244.1			AAH32244.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3893156	Chr.19:1766738 - 2115791 on Build GRCh38	Loss	BTBD2 ONECUT3 ATP8B3 ABHD17A KLF16 AP3D1 MIR1909 MKNK2 CSNK1G2-AS1 ADAT3 CSNK1G2 SCAMP4 MOB3A REXO1 LOC100288123 IZUMO4
esv32942	Chr.19:1320268 - 1999205 on Build GRCh38	Gain+Loss	MUM1 BTBD2 DAZAP1 KLF16 APC2 NDUFS7 ADAT3 CSNK1G2 SCAMP4 ADAMTSL5 TCF3 REXO1 LOC100288123 MEX3D PCSK4 UQCR11 MBD3 RPS15 ONECUT3 ATP8B3 ABHD17A MIR1909 C19orf25 CSNK1G2-AS1 GAMT REEP6 PLK5
nsv470107	Chr.19:1782799 - 2100347 on Build GRCh38	Loss	BTBD2 ATP8B3 ABHD17A KLF16 MIR1909 MKNK2 CSNK1G2-AS1 ADAT3 CSNK1G2 SCAMP4 MOB3A REXO1 LOC100288123 IZUMO4
nsv1160560	Chr.19:1791100 - 1916393 on Build GRCh38	Deletion	ADAT3 SCAMP4 REXO1 LOC100288123 ATP8B3 ABHD17A KLF16 MIR1909
nsv578337	Chr.19:1808864 - 1904613 on Build GRCh38	Gain	REXO1 LOC100288123 ATP8B3 ABHD17A KLF16 MIR1909
nsv953942	Chr.19:1371602 - 2057401 on Build GRCh38	Deletion	MUM1 BTBD2 DAZAP1 KLF16 APC2 MKNK2 NDUFS7 ADAT3 CSNK1G2 SCAMP4 ADAMTSL5 TCF3 REXO1 LOC100288123 MEX3D PCSK4 UQCR11 MBD3 RPS15 ONECUT3 ATP8B3 ABHD17A MIR1909 C19orf25 CSNK1G2-AS1 GAMT REEP6 PLK5

More Information

Additional Information:

For this assay, SNP(s) [rs147979300] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

exoribonuclease

Gene Ontology Categories:

Process(es)

nucleic acid phosphodiester bond hydrolysis

Function(s)

nucleic acid binding
exonuclease activity