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See other SPATA2L CNV Assays ›
Gene Symbol
SPATA2L
Assay Reference Genome
Location

Chr.16:89696894 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02333936_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 124044

Gene Name:

 spermatogenesis associated 2 like

Gene Aliases:

 C16orf76, tamo

Location:

 Chr.16:89696357-89701993 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA2L NM_152339.3 3 1802 NP_689552.2
XM_005256279.4 3 2219 XP_005256336.1
AF070574.1 1 1033
AK127372.1 2 1606
BC027606.1 AAH27606.1
BC039608.1 3 1780 AAH39608.1
BC053588.1 3 1784 AAH53588.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion FANCA CDK10 VPS9D1 SPATA2L VPS9D1-AS1 ZNF276
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain SPATA33 FANCA CDK10 VPS9D1 SPATA2L LOC107984817 VPS9D1-AS1 LOC105371419 ZNF276 SPIRE2
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss DBNDD1 AFG3L1P TCF25 VPS9D1 CHMP1A DEF8 LOC107984817 LOC105371419 ZNF276 MC1R GAS8-AS1 SPATA33 FANCA DPEP1 CENPBD1 CDK10 SPATA2L VPS9D1-AS1 GAS8 TUBB3 SPIRE2
nsv516241 Chr.16:89696002 - 89723490 on Build GRCh38 Loss CDK10 VPS9D1 SPATA2L VPS9D1-AS1 ZNF276
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss DBNDD1 SNORD68 AFG3L1P URAHP LOC107984817 ZNF276 SPATA33 PRDM7 CDK10 RPL13 ZNF778 GAS8 LOC105371414 CPNE7 SPIRE2 TCF25 VPS9D1 ANKRD11 CHMP1A DEF8 SPG7 FAM157C TUBB8P7 LOC105371419 LOC101927817 MC1R GAS8-AS1 FANCA DPEP1 CENPBD1 SPATA2L VPS9D1-AS1 LOC100287036 TUBB3
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain SPATA33 DPEP1 CDK10 CHMP1A SPATA2L
nsv833330 Chr.16:89678466 - 89741783 on Build GRCh38 Loss FANCA CDK10 VPS9D1 SPATA2L VPS9D1-AS1 ZNF276
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DBNDD1 GALNS ACSF3 URAHP LOC107984817 SLC22A31 SPATA33 PABPN1L RPL13 MIR4722 CDT1 MVD LOC101927793 GAS8 LOC105371414 IL17C CPNE7 CBFA2T3 SPIRE2 TRAPPC2L TCF25 CHMP1A SNAI3 SNAI3-AS1 LOC107987238 LOC100289580 MC1R CTU2 FANCA DPEP1 CENPBD1 LOC339059 LOC400558 SPATA2L VPS9D1-AS1 SNORD68 AFG3L1P CYBA LOC100129697 ZNF276 RNF166 PRDM7 CDK10 ZNF778 PIEZO1 VPS9D1 ANKRD11 DEF8 SPG7 FAM157C TUBB8P7 LOC105371419 LOC101927817 LOC105371409 GAS8-AS1 CDH15 APRT LOC100287036 LINC00304 TUBB3
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion SNORD68 VPS9D1 CHMP1A SPG7 ZNF276 SPATA33 FANCA DPEP1 CDK10 RPL13 SPATA2L VPS9D1-AS1 CPNE7

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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