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See other SPATC1 CNV Assays ›
Gene Symbol
SPATC1
Assay Reference Genome
Location

Chr.8:144012567 on build GRCh38
Cytoband
8q24.3
Assay ID Hs02341198_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 375686

Gene Name:

 spermatogenesis and centriole associated 1

Gene Aliases:

 SPATA15

Location:

 Chr.8:144010992-144047114 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATC1 NM_001134374.1 1 154 NP_001127846.1
NM_198572.2 1 154 NP_940974.2
XM_011517021.1 1 154 XP_011515323.1
XM_011517022.2 XP_011515324.1
AB092352.1 1 142 BAD08232.1
AK301710.1 1 142
BC050390.1 1 144 AAH50390.1
BC053547.1 1 129 AAH53547.1
DB052198.1 1 154

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss HGH1 EXOSC4 SPATC1 GPAA1 MAF1 SHARPIN SMPD5 WDR97 OPLAH CYC1 MROH1 MIR6846 MIR6847
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss HGH1 RECQL4 MIR939 EXOSC4 FBXL6 GPAA1 MAF1 SHARPIN SLC39A4 ADCK5 LOC101928902 TONSL-AS1 SLC52A2 TONSL KIFC2 LOC101928953 MIR6893 SMPD5 PLEC WDR97 CYC1 SCRT1 MROH1 PPP1R16A MFSD3 FOXH1 MIR6846 VPS28 GRINA PARP10 MIR6848 CPSF1 SPATC1 CYHR1 BOP1 DGAT1 SCX HSF1 OPLAH MIR661 MIR6849 MIR1234 TMEM249 GPT LRRC14 MIR7112 MIR6847
nsv6446 Chr.8:144012529 - 144050050 on Build GRCh38 Insertion SMPD5 SPATC1
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss HGH1 RECQL4 MIR939 EXOSC4 FBXL6 GPAA1 MAF1 SHARPIN SLC39A4 ADCK5 LOC101928902 TONSL-AS1 SLC52A2 TONSL KIFC2 LOC101928953 MIR6893 SMPD5 PLEC WDR97 CYC1 SCRT1 MROH1 PPP1R16A MFSD3 FOXH1 MIR6846 VPS28 GRINA PARP10 MIR6848 CPSF1 SPATC1 CYHR1 BOP1 DGAT1 SCX HSF1 OPLAH MIR661 MIR6849 MIR1234 TMEM249 GPT LRRC14 MIR7112 MIR6847
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss GRINA PARP10 EXOSC4 SPATC1 GPAA1 MAF1 SHARPIN SMPD5 PLEC WDR97 OPLAH CYC1 MIR6846 MIR6847
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss HGH1 GRINA PARP10 EXOSC4 SPATC1 GPAA1 MAF1 SHARPIN EPPK1 SMPD5 PLEC WDR97 OPLAH CYC1 MIR661 MROH1 MIR6846 MIR6847
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion GRINA PARP10 EXOSC4 SPATC1 GPAA1 MAF1 SHARPIN EPPK1 SMPD5 PLEC WDR97 OPLAH CYC1 MIR661 MIR6846 MIR6847
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion NRBP2 GRINA PARP10 EXOSC4 SPATC1 MIR6845 EPPK1 SMPD5 SCRIB PUF60 PLEC OPLAH MIR661 MIR6846 MIR937 LOC642574 MIR6847
esv21567 Chr.8:144004337 - 144012898 on Build GRCh38 Gain SPATC1
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain GRINA PARP10 SMPD5 EXOSC4 SPATC1 GPAA1 PLEC OPLAH CYC1 MIR661 MIR6846 MIR6847
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain GRINA PARP10 EXOSC4 SPATC1 GPAA1 MAF1 SHARPIN SMPD5 PLEC WDR97 OPLAH CYC1 MIR661 MIR6846 MIR6847
nsv612906 Chr.8:143917935 - 144090784 on Build GRCh38 Loss GRINA PARP10 SMPD5 EXOSC4 SPATC1 GPAA1 PLEC OPLAH MIR661 MIR6846 MIR6847

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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