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See other ATF5 CNV Assays ›
Gene Symbol
ATF5
Assay Reference Genome
Location

Chr.19:49933694 on build GRCh38
Cytoband
19q13.33
Assay ID Hs02347171_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
Your Price
Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 22809

Gene Name:

 activating transcription factor 5

Gene Aliases:

 ATFX, HMFN0395

Location:

 Chr.19:49928702-49933936 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATF5 NM_001193646.1 3 1828 NP_001180575.1
NM_001290746.1 3 1799 NP_001277675.1
NM_012068.5 4 2033 NP_036200.2
XM_011526629.2 3 1735 XP_011524931.1
AB021663.2 3 1770 BAA78477.2
AB073613.1 3 1766 BAD38650.1
AK091985.1 2 1742
BU730542.1 1 261

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss FGF21 MIR4750 SNAR-A13 BCAT2 RPL13A GYS1 PLEKHA4 AP2A1 SIGLEC16 GRIN2D PTH2 PRR12 NUP62 SNAR-C5 FAM83E TMEM143 LOC105372430 LOC105447645 RPL18 PLA2G4C-AS1 KDELR1 LOC100287477 KCNJ14 FLJ26850 PPFIA3 C19orf73 C19orf68 TULP2 RASIP1 SNORD33 PTOV1-AS2 SNAR-A9 CA11 SNAR-C3 MIR6798 SULT2B1 NTN5 VRK3 LOC101059948 NUCB1-AS1 CPT1C CGB5 SNAR-C4 LIN7B SNORD35B RRAS RPS11 CGB1 TBC1D17 SNAR-A10 SNAR-A11 RCN3 SNAR-A8 LOC101928295 ADM5 FUT2 TSKS IL4I1 PNKP GFY SNAR-A6 SNAR-A3 CGB3 SNAR-C1 ATF5 PTOV1-AS1 ZNF114 MIR4751 GRWD1 ELSPBP1 SYNGR4 SNAR-A14 DHDH HSD17B14 MIR150 MIR5088 PLA2G4C PRRG2 SNAR-A2 CABP5 BSPH1 FUZ MIR6799 SNORD35A NOSIP AKT1S1 SNAR-B1 SNAR-C2 PPP1R15A FTL DBP CGB8 SNORD32A SNRNP70 FCGRT SNAR-D BAX SNAR-A7 SEC1P FLT3LG SLC17A7 NTF4 CCDC155 PTOV1 LIG1 SPHK2 PIH1D1 PRMT1 FUT1 BCL2L12 SPACA4 TEAD2 MIR4324 SNAR-G2 CARD8 CYTH2 CGB2 NUCB1 EMP3 CARD8-AS1 HRC MIR4749 MED25 SNAR-A4 IRF3 MAMSTR LHB LMTK3 KCNA7 CCDC114 SNAR-A12 RUVBL2 MIR6800 DKKL1 SNAR-G1 SIGLEC11 SCAF1 TRPM4 CGB7 ZNF473 SNORD34 SNAR-B2 IZUMO1 SNAR-A1 CD37 SLC6A16 SNAR-A5 ALDH16A1
nsv1065648 Chr.19:49924738 - 50001154 on Build GRCh38 Gain SIGLEC16 NUP62 ATF5 MIR4751 IL4I1 SIGLEC11 VRK3
dgv53n68 Chr.19:49724393 - 49943224 on Build GRCh38 Loss MIR4750 ATF5 MIR6800 PTOV1-AS1 MIR4751 FUZ MIR6799 TBC1D17 PTOV1 AP2A1 PTOV1-AS2 AKT1S1 MIR4749 MED25 NUP62 TSKS IL4I1 PNKP
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion CPT1C MIR4750 FUZ MIR6799 RRAS TBC1D17 AP2A1 NOSIP AKT1S1 PRR12 MIR4749 MED25 NUP62 ADM5 IRF3 TSKS IL4I1 PNKP ATF5 MIR6800 PTOV1-AS1 MIR4751 SCAF1 PTOV1 PTOV1-AS2 PRMT1 MIR5088 BCL2L12 PRRG2
nsv579910 Chr.19:49915478 - 49957657 on Build GRCh38 Gain NUP62 ATF5 MIR4751 IL4I1 SIGLEC11
esv3644630 Chr.19:49877826 - 50039767 on Build GRCh38 Gain AKT1S1 SIGLEC16 NUP62 MIR4750 ATF5 MIR4751 IL4I1 SIGLEC11 ZNF473 TBC1D17 VRK3
dgv54n68 Chr.19:49848512 - 50008788 on Build GRCh38 Loss MIR4750 ATF5 PTOV1-AS1 MIR4751 SIGLEC11 TBC1D17 PTOV1 PTOV1-AS2 AKT1S1 SIGLEC16 MIR4749 NUP62 IL4I1 PNKP VRK3
nsv1058623 Chr.19:49918762 - 49966847 on Build GRCh38 Gain NUP62 ATF5 MIR4751 IL4I1 SIGLEC11
nsv579911 Chr.19:49930731 - 49969159 on Build GRCh38 Gain ATF5 MIR4751 SIGLEC11

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