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See other ARHGAP39 CNV Assays ›
Gene Symbol
ARHGAP39
Assay Reference Genome
Location

Chr.8:144530132 on build GRCh38
Cytoband
8q24.3
Assay ID Hs02351445_cn
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Assay Details

Target Gene Details

Entrez Gene ID:

 80728

Gene Name:

 Rho GTPase activating protein 39

Gene Aliases:

 CrGAP, Vilse

Location:

 Chr.8:144529179-144700520 on Build GRCh38

Assay Gene Location:

 Within Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ARHGAP39 NM_001308207.1 12 4097 NP_001295136.1
NM_001308208.1 11 3750 NP_001295137.1
NM_025251.2 11 3716 NP_079527.1
XM_011517308.1 12 3997 XP_011515610.1
XM_011517309.1 12 3901 XP_011515611.1
XM_011517312.2 10 4535 XP_011515614.1
XM_017013870.1 13 5069 XP_016869359.1
XM_017013871.1 12 4128 XP_016869360.1
AB051475.1 12 4101
AK092501.1 7 1163
BC013071.2 5 1027 AAH13071.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv522459 Chr.8:144519234 - 144845293 on Build GRCh38 Loss ZNF34 COMMD5 ZNF251 RPL8 ZNF517 MIR6850 ZNF7 LRRC24 ARHGAP39 C8orf82 LRRC14
nsv612951 Chr.8:144479830 - 144677692 on Build GRCh38 Loss PPP1R16A GPT MFSD3 LOC101928953 LRRC24 ARHGAP39 C8orf82 RECQL4 LRRC14
nsv831489 Chr.8:144342140 - 144544026 on Build GRCh38 Loss MIR6893 MFSD3 TONSL-AS1 VPS28 LRRC24 C8orf82 MIR6849 CPSF1 ADCK5 MIR1234 TMEM249 LOC101928902 PPP1R16A KIFC2 LOC101928953 RECQL4 SLC52A2 LRRC14 SLC39A4 TONSL GPT MIR939 CYHR1 ARHGAP39 FBXL6 FOXH1
dgv1207n67 Chr.8:144498396 - 144532417 on Build GRCh38 Gain PPP1R16A GPT MFSD3 LOC101928953 LRRC24 ARHGAP39 C8orf82 RECQL4 LRRC14
nsv612940 Chr.8:144436292 - 144613673 on Build GRCh38 Loss PPP1R16A MFSD3 TONSL-AS1 KIFC2 LOC101928953 LRRC24 C8orf82 RECQL4 LRRC14 TONSL GPT CYHR1 ARHGAP39 FOXH1
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain MIR6893 MFSD3 TONSL-AS1 VPS28 LRRC24 C8orf82 BOP1 SMPD5 MIR6849 CPSF1 MIR7112 SCRT1 WDR97 CYC1 HSF1 SCX ADCK5 MIR1234 TMEM249 LOC101928902 MROH1 PPP1R16A HGH1 DGAT1 KIFC2 LOC101928953 MIR6847 EXOSC4 RECQL4 MAF1 SLC52A2 LRRC14 SLC39A4 TONSL OPLAH ZNF251 GPT SPATC1 MIR939 CYHR1 GPAA1 ARHGAP39 FBXL6 MIR6848 MIR6846 SHARPIN FOXH1

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