Hs02357632_cn

• Gene Symbol: LMF2
• Assay Reference Genome Location: Chr.22:50506038 on build GRCh38
• Cytoband: 22q13.33

Target Gene Details

• Entrez Gene ID: 91289
• Gene Name: lipase maturation factor 2
• Gene Aliases: TMEM112B, TMEM153
• Location: Chr.22:50502947-50507840 on Build GRCh38
• Assay Gene Location: Overlaps Intron 4 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LMF2	NM_033200.2			NP_149977.2
	XM_005261955.3			XP_005262012.1
	XM_006724426.3			XP_006724489.1
	XM_006724427.3			XP_006724490.1
	XM_017029077.1			XP_016884566.1
	BC002942.2			AAH02942.2
	BC014652.1			AAH14652.1
	BC021143.1			AAH21143.1
	CR456605.1			CAG30491.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2758852	Chr.22:50491090 - 50578979 on Build GRCh38	Loss	ODF3B SCO2 LMF2 NCAPH2 CPT1B CHKB-CPT1B TYMP SYCE3 KLHDC7B CHKB
nsv3669	Chr.22:50475511 - 50509415 on Build GRCh38	Insertion	LMF2 NCAPH2 MIOX ADM2
nsv1160782	Chr.22:50463961 - 50571524 on Build GRCh38	Deletion	ODF3B SCO2 LMF2 NCAPH2 CPT1B MIOX CHKB-CPT1B ADM2 TYMP SBF1 SYCE3 KLHDC7B
nsv1057656	Chr.22:50478783 - 50595520 on Build GRCh38	Gain	ODF3B SCO2 LMF2 CPT1B CHKB-AS1 ADM2 TYMP SYCE3 KLHDC7B CHKB NCAPH2 MIOX CHKB-CPT1B
nsv834238	Chr.22:50402690 - 50556965 on Build GRCh38	Loss	ODF3B SCO2 LMF2 NCAPH2 PPP6R2 MIOX ADM2 LOC107985556 TYMP SBF1 SYCE3 KLHDC7B
nsv471224	Chr.22:50435189 - 50580482 on Build GRCh38	Loss	ODF3B SCO2 LMF2 PPP6R2 CPT1B ADM2 TYMP SYCE3 KLHDC7B CHKB NCAPH2 MIOX CHKB-CPT1B SBF1
nsv829340	Chr.22:50505720 - 50603696 on Build GRCh38	Gain	ODF3B SCO2 LMF2 NCAPH2 CPT1B CHKB-AS1 CHKB-CPT1B TYMP MAPK8IP2 SYCE3 KLHDC7B CHKB
nsv955201	Chr.22:50421672 - 50537371 on Build GRCh38	Deletion	ODF3B SCO2 LMF2 NCAPH2 PPP6R2 MIOX ADM2 LOC107985556 TYMP SBF1
nsv482079	Chr.22:50502951 - 50507684 on Build GRCh38	Gain	LMF2
nsv834239	Chr.22:50485317 - 50630215 on Build GRCh38	Loss	ODF3B SCO2 LMF2 CPT1B CHKB-AS1 ADM2 TYMP MAPK8IP2 ARSA SYCE3 KLHDC7B CHKB NCAPH2 MIOX CHKB-CPT1B
nsv589222	Chr.22:50491152 - 50589773 on Build GRCh38	Gain	ODF3B SCO2 LMF2 NCAPH2 CPT1B CHKB-AS1 CHKB-CPT1B TYMP SYCE3 KLHDC7B CHKB

More Information

Additional Information:

For this assay, SNP(s) [rs112184818] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding