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See other GRIN1 CNV Assays ›
Gene Symbol
GRIN1
Assay Reference Genome
Location

Chr.9:137168765 on build GRCh38
Cytoband
9q34.3
Assay ID Hs02362244_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 2902

Gene Name:

 glutamate ionotropic receptor NMDA type subunit 1

Gene Aliases:

 GluN1, MRD8, NMD-R1, NMDA1, NMDAR1, NR1

Location:

 Chr.9:137139092-137168762 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 22
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GRIN1 NM_000832.6 NP_000823.4
NM_001185090.1 NP_001172019.1
NM_001185091.1 NP_001172020.1
NM_007327.3 NP_015566.1
NM_021569.3 NP_067544.1
XM_005266071.3 XP_005266128.1
XM_005266072.3 XP_005266129.1
XM_005266073.4 XP_005266130.1
BU728516.1
L13266.1 AAB59360.1
L13267.1 AAA36198.1
L13268.1 AAB59361.1
U08106.1 AAA62111.1

Target Gene Details

Entrez Gene ID:

 389816

Gene Name:

 leucine rich repeat containing 26

Gene Aliases:

 CAPC, bA350O14.10

Location:

 Chr.9:137168758-137170039 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LRRC26 NM_001013653.2 NP_001013675.1
BC140911.1
CB160046.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3622023 Chr.9:137165910 - 137174346 on Build GRCh38 Gain LRRC26 GRIN1 TMEM210 MIR3621
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss UAP1L1 GRIN1 PRR31 LOC101930307 ENTPD2 PTGDS TMEM210 MIR3621 C9orf142 CLIC3 MAN1B1-AS1 LRRC26 LCNL1 MAN1B1 NPDC1 ABCA2 C9orf139 DPP7 FUT7 SAPCD2
nsv616007 Chr.9:137079368 - 137240666 on Build GRCh38 Loss UAP1L1 ANAPC2 GRIN1 RNF208 SLC34A3 RNF224 LOC101930307 TMEM210 MIR3621 MAN1B1-AS1 LRRC26 TMEM203 MAN1B1 DPP7 NDOR1 CYSRT1 TPRN SSNA1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss ANAPC2 GRIN1 FAM166A SLC34A3 ENTPD2 C9orf142 LRRC26 PHPT1 MAN1B1 NPDC1 MIR7114 PNPLA7 NSMF FUT7 TRAF2 MAMDC4 UAP1L1 STPG3 EXD3 RNF224 PRR31 LOC101930307 NRARP TMEM210 C8G TOR4A MAN1B1-AS1 TMEM203 FBXW5 NOXA1 MIR4479 C9orf173-AS1 LCN12 NELFB RABL6 MIR3621 MIR4292 CCDC183 ABCA2 C9orf172 DPP7 CCDC183-AS1 EDF1 NDOR1 ENTPD8 CYSRT1 TPRN SAPCD2 RNF208 TUBB4B PTGDS CLIC3 LCNL1 C9orf139 SSNA1
nsv951207 Chr.9:137136949 - 137379148 on Build GRCh38 Deletion C9orf173-AS1 STPG3 ANAPC2 GRIN1 FAM166A EXD3 RNF208 SLC34A3 RNF224 NELFB TUBB4B NRARP TMEM210 MIR3621 TOR4A LRRC26 TMEM203 NDOR1 CYSRT1 TPRN SSNA1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss GRIN1 ENTPD2 SNHG7 C9orf163 C9orf142 MIR6722 EGFL7 LRRC26 PHPT1 MAN1B1 CARD9 NPDC1 SNAPC4 LCN6 FUT7 TRAF2 MAMDC4 UAP1L1 MIR126 NOTCH1 LINC01451 PRR31 LOC101930307 FAM69B LCN10 TMEM210 C8G LCN8 MAN1B1-AS1 INPP5E MIR4673 FBXW5 DNLZ MIR4479 SDCCAG3 SNORA17B AGPAT2 LCN12 RABL6 MIR3621 MIR4292 CCDC183 ABCA2 C9orf172 DPP7 CCDC183-AS1 EDF1 TMEM141 LCN15 SAPCD2 HSPC324 MIR4674 NALT1 PTGDS CLIC3 LOC100128593 LCNL1 C9orf139 SNORA17A SEC16A PMPCA
nsv1161918 Chr.9:137118319 - 137438026 on Build GRCh38 Duplication C9orf173-AS1 STPG3 ANAPC2 GRIN1 FAM166A EXD3 RNF208 SLC34A3 RNF224 NELFB TUBB4B NRARP TMEM210 MIR3621 TOR4A LRRC26 TMEM203 NOXA1 NDOR1 ENTPD8 CYSRT1 TPRN SSNA1
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss UAP1L1 GRIN1 LOC101930307 ENTPD2 TMEM210 MIR3621 MAN1B1-AS1 LRRC26 MAN1B1 NPDC1 C9orf139 DPP7 SAPCD2
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain UAP1L1 ANAPC2 GRIN1 LOC101930307 ENTPD2 TMEM210 MIR3621 MAN1B1-AS1 LRRC26 MAN1B1 NPDC1 C9orf139 DPP7 FUT7 SAPCD2 SSNA1
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion ANAPC2 GRIN1 FAM166A SLC34A3 ENTPD2 SNHG7 C9orf142 MIR6722 EGFL7 LRRC26 PHPT1 MAN1B1 NPDC1 LCN6 FUT7 TRAF2 MAMDC4 UAP1L1 STPG3 MIR126 EXD3 RNF224 LINC01451 PRR31 LOC101930307 FAM69B NRARP LCN10 TMEM210 C8G LCN8 TOR4A MAN1B1-AS1 TMEM203 FBXW5 MIR4479 SNORA17B C9orf173-AS1 AGPAT2 LCN12 NELFB RABL6 MIR3621 MIR4292 CCDC183 ABCA2 C9orf172 DPP7 CCDC183-AS1 EDF1 NDOR1 TMEM141 LCN15 CYSRT1 TPRN SAPCD2 HSPC324 RNF208 TUBB4B PTGDS CLIC3 LOC100128593 LCNL1 C9orf139 SNORA17A SSNA1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Function(s) Process(es)


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