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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49705278 on build GRCh38
Cytoband
19q13.33
Assay ID Hs02363181_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 13 - Intron 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AB208884.1 BAD92121.1
AF357970.1 AAL99615.1
AK074389.1 BAB85068.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
BC029104.1 AAH29104.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss ADM5 PRR12 RRAS PRMT1 SCAF1 MIR5088 NOSIP PRRG2 IRF3 BCL2L12 CPT1C
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss ADM5 PRR12 RRAS PRMT1 SCAF1 MIR5088 NOSIP PRRG2 IRF3 BCL2L12 CPT1C
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss FGF21 CARD8 SULT2B1 MIR4749 NTF4 SNAR-G2 RPL13A PPFIA3 HRC SNAR-C2 EMP3 SNAR-A6 CPT1C SNAR-A7 SNORD34 SNAR-A8 FUT1 CGB5 TSKS ATF5 MIR4751 GFY SNAR-A1 DBP SNAR-A3 ADM5 SNAR-A12 PRMT1 GRIN2D CCDC114 SNAR-A10 RUVBL2 FAM83E PIH1D1 BCL2L12 ZNF473 CYTH2 LMTK3 SIGLEC11 CABP5 BSPH1 LHB FTL SNAR-B1 VRK3 SNRNP70 RASIP1 PLA2G4C-AS1 SNAR-A11 SLC17A7 SNORD32A NUP62 MIR4750 PLEKHA4 IL4I1 FUZ PTOV1-AS2 CD37 ALDH16A1 AKT1S1 PTOV1-AS1 NUCB1 C19orf68 PRR12 TMEM143 DHDH MIR150 HSD17B14 SNAR-A9 KCNA7 CGB3 SNAR-D IRF3 FUT2 BCAT2 MIR6799 SNAR-A13 NTN5 SNORD35A SNAR-C5 NOSIP LIN7B RRAS SYNGR4 SNAR-C1 AP2A1 GRWD1 SEC1P SPHK2 SNAR-A2 SNAR-A14 TBC1D17 LOC101059948 LOC100287477 SNAR-G1 SLC6A16 PNKP SNAR-B2 NUCB1-AS1 MIR4324 KCNJ14 CGB2 MED25 C19orf73 SPACA4 SNAR-A5 CGB1 CA11 FLT3LG SNORD35B LOC101928295 CARD8-AS1 ELSPBP1 SNAR-C3 LOC105447645 SNAR-A4 SIGLEC16 PTOV1 PPP1R15A PLA2G4C KDELR1 TRPM4 MIR5088 LIG1 MIR6800 CGB8 RPL18 TEAD2 RCN3 PTH2 SCAF1 DKKL1 MAMSTR ZNF114 FLJ26850 PRRG2 FCGRT MIR6798 SNAR-C4 IZUMO1 CGB7 GYS1 BAX TULP2 CCDC155 SNORD33 LOC105372430 RPS11
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain ADM5 PRR12 RRAS PRMT1 SCAF1 MIR5088 IRF3 BCL2L12 CPT1C
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion PTOV1 MIR4749 RRAS AP2A1 MIR5088 NUP62 MIR4750 CPT1C MIR6800 IL4I1 FUZ PTOV1-AS2 TBC1D17 SCAF1 PNKP TSKS ATF5 PRRG2 MIR4751 AKT1S1 MED25 PTOV1-AS1 ADM5 PRR12 PRMT1 IRF3 BCL2L12 MIR6799 NOSIP
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain ADM5 PRR12 RRAS PRMT1 SCAF1 MIR5088 NOSIP PRRG2 IRF3 BCL2L12 CPT1C
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion RRAS RPL13A AP2A1 MIR5088 SNORD32A CPT1C MIR6800 FUZ SNORD34 RCN3 SCAF1 TSKS PRRG2 MED25 PTOV1-AS1 ADM5 FCGRT PRR12 PRMT1 MIR150 IRF3 BCL2L12 SNORD33 SNORD35B MIR6799 SNORD35A RPS11 NOSIP

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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