Genomic Map
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Target Gene Details
Entrez Gene ID: | 525 |
Gene Name: | ATPase H+ transporting V1 subunit B1 |
Gene Aliases: |
ATP6B1, RTA1B, VATB, VMA2, VPP3 |
Location: |
Chr.2:70935868-70965431 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ATP6V1B1 | NM_001692.3 | 1 | 52 | NP_001683.2 |
| AK223151.1 | BAD96871.1 | |||
| AK291121.1 | 1 | 61 | ||
| AK301542.1 | ||||
| AK313194.1 | ||||
| AU126647.2 | ||||
| BC063411.1 | AAH63411.1 | |||
| DA845716.1 | 1 | 52 | ||
| M25809.1 | AAA36498.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1013232 | Chr.2:70849342 - 71049568 on Build GRCh38 | Gain |
 ATP6V1B1-AS1
ATP6V1B1
TEX261
LINC01143
VAX2
ANKRD53
OR7E91P
CD207
|
| nsv1004459 | Chr.2:70824987 - 70955770 on Build GRCh38 | Loss |
ATP6V1B1-AS1
ATP6V1B1
CLEC4F
LINC01143
VAX2
CD207
|
| nsv1014516 | Chr.2:70881638 - 70962921 on Build GRCh38 | Gain |
ATP6V1B1-AS1
ATP6V1B1
LINC01143
VAX2
|
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Additional Information:
For this assay, SNP(s) [rs79652147] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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