Hs02379557_cn

• Gene Symbol: OR52A1
• Assay Reference Genome Location: Chr.11:5151944 on build GRCh38
• Cytoband: 11p15.4

Target Gene Details

• Entrez Gene ID: 23538
• Gene Name: olfactory receptor family 52 subfamily A member 1
• Gene Aliases: HPFH1OR
• Location: Chr.11:5151431-5152369 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
OR52A1	NM_012375.2	1	426	NP_036507.2
	BC111722.1	1	426	AAI11723.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2760169	Chr.11:4940288 - 5212591 on Build GRCh38	Gain+Loss	OR51A4 OR52A1 OR52J3 OR52E2 OR52A5 OR52A4P OR51L1 MMP26 OR51V1 OR51A2
esv3625208	Chr.11:5144423 - 5175233 on Build GRCh38	Loss	OR52A1
nsv553219	Chr.11:5004970 - 5193183 on Build GRCh38	Gain	OR52A1 OR52J3 OR52E2 OR52A5 OR52A4P
esv3891917	Chr.11:5081246 - 5227774 on Build GRCh38	Loss	OR52A1 OR52A5 OR52A4P HBB OR51V1
nsv553224	Chr.11:5117503 - 5186159 on Build GRCh38	Loss	OR52A1 OR52A5 OR52A4P
esv3625206	Chr.11:5114340 - 5159347 on Build GRCh38	Loss	OR52A1 OR52A5 OR52A4P
nsv1054847	Chr.11:4621645 - 5179426 on Build GRCh38	Gain	OR52R1 OR51A4 OR52A1 OR52J3 OR51F2 OR52E2 OR52A4P OR51G1 OR51L1 OR51A2 OR51F1 OR51A7 OR51E2 OR52A5 OR51T1 OR51S1 MMP26 OR51E1 OR51G2 OR51D1

More Information

Additional Information:

For this assay, SNP(s) [rs77308879] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Process(es)

signal transduction
G-protein coupled receptor signaling pathway
sensory perception of smell
detection of chemical stimulus involved in sensory perception of smell

Function(s)

transmembrane signaling receptor activity
G-protein coupled receptor activity
olfactory receptor activity