Genomic Map
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Target Gene Details
Entrez Gene ID: | 9013 |
Gene Name: | TATA-box binding protein associated factor, RNA polymerase I subunit C |
Gene Aliases: |
MGC:39976, SL1, TAFI110, TAFI95 |
Location: |
Chr.16:84177847-84187070 on Build GRCh38 |
Assay Gene Location: | Within Exon 14 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TAF1C | NM_001243156.1 | 15 | 2437 | NP_001230085.1 |
| NM_001243157.1 | 12 | 2071 | NP_001230086.1 | |
| NM_001243158.1 | 11 | 1932 | NP_001230087.1 | |
| NM_001243159.1 | 14 | 2404 | NP_001230088.1 | |
| NM_001243160.1 | 12 | 2249 | NP_001230089.1 | |
| NM_005679.3 | 14 | 2515 | NP_005670.3 | |
| NM_139353.2 | 15 | 2273 | NP_647610.2 | |
| XM_005256226.3 | 14 | 2438 | XP_005256283.1 | |
| XM_005256227.3 | 14 | 2349 | XP_005256284.1 | |
| XM_006721325.3 | 15 | 2530 | XP_006721388.1 | |
| XM_006721326.3 | 16 | 2452 | XP_006721389.1 | |
| XM_017023845.1 | 15 | 2360 | XP_016879334.1 | |
| XM_017023846.1 | 13 | 2299 | XP_016879335.1 | |
| XM_017023847.1 | 15 | 2271 | XP_016879336.1 | |
| XM_017023848.1 | 9 | 2122 | XP_016879337.1 | |
| AB209594.1 | 13 | 3213 | BAD92831.1 | |
| AK097031.1 | 12 | 2218 | ||
| AK299060.1 | 12 | 2034 | ||
| AK299347.1 | 15 | 2408 | ||
| AK304261.1 | 14 | 2386 | ||
| AK315982.1 | 11 | 1919 | ||
| BC028131.1 | 15 | 2252 | AAH28131.1 | |
| L39059.1 | 14 | 2457 | AAA62861.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3639413 | Chr.16:84172318 - 84253359 on Build GRCh38 | Loss |
 KCNG4
ADAD2
DNAAF1
TAF1C
|
| nsv833309 | Chr.16:84076867 - 84248591 on Build GRCh38 | Loss |
KCNG4
MBTPS1
ADAD2
DNAAF1
TAF1C
LOC729887
HSDL1
|
| nsv1065790 | Chr.16:83830329 - 84243597 on Build GRCh38 | Loss |
KCNG4
MBTPS1
SLC38A8
OSGIN1
LOC105371371
ADAD2
DNAAF1
NECAB2
TAF1C
LOC729887
MLYCD
HSDL1
|
| esv2761930 | Chr.16:84007420 - 84312461 on Build GRCh38 | Gain |
LOC105376777
KCNG4
MBTPS1
SLC38A8
ADAD2
DNAAF1
TAF1C
LOC729887
WFDC1
HSDL1
|
| nsv523437 | Chr.16:84176132 - 84196770 on Build GRCh38 | Loss |
ADAD2
DNAAF1
TAF1C
|
| nsv573423 | Chr.16:84179104 - 84190716 on Build GRCh38 | Loss |
TAF1C
|
| esv3639414 | Chr.16:84176251 - 84352273 on Build GRCh38 | Loss |
LOC105376777
KCNG4
ADAD2
DNAAF1
TAF1C
WFDC1
|
| esv3639412 | Chr.16:84170074 - 84221406 on Build GRCh38 | Loss |
KCNG4
ADAD2
DNAAF1
TAF1C
|
| nsv573422 | Chr.16:84178502 - 84180359 on Build GRCh38 | Loss |
DNAAF1
TAF1C
|
| nsv483044 | Chr.16:84166395 - 87066394 on Build GRCh38 | Gain |
LOC105376777
LOC101928557
LOC400548
LOC146513
ADAD2
KIAA0513
LINC01082
LOC101928474
LINC01081
GINS2
FOXC2
COTL1
MIR1910
FAM92B
USP10
MTHFSD
GSE1
ATP2C2
LOC102724344
FLJ30679
DNAAF1
LOC440390
TLDC1
ZDHHC7
FENDRR
KCNG4
FOXL1
FOXF1
LOC105371374
KLHL36
TAF1C
EMC8
FOXC2-AS1
COX4I1
LINC00311
CRISPLD2
C16orf74
LINC00917
MIR6774
LOC101928614
WFDC1
MIR5093
IRF8
|
| nsv1059227 | Chr.16:84029323 - 84233403 on Build GRCh38 | Loss |
KCNG4
MBTPS1
SLC38A8
ADAD2
DNAAF1
TAF1C
LOC729887
HSDL1
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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