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See other SPATC1 CNV Assays ›
Gene Symbol
SPATC1
Assay Reference Genome
Location

Chr.8:144047136 on build GRCh38
Cytoband
8q24.3
Assay ID Hs02423532_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 375686

Gene Name:

 spermatogenesis and centriole associated 1

Gene Aliases:

 SPATA15

Location:

 Chr.8:144010992-144047114 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATC1 NM_001134374.1 NP_001127846.1
NM_198572.2 NP_940974.2
BC053547.1 AAH53547.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv824801 Chr.8:144046683 - 144059698 on Build GRCh38 Gain SMPD5 OPLAH SPATC1 MIR6846
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss MIR1234 MIR661 HGH1 PLEC RECQL4 TONSL PARP10 MIR6893 KIFC2 SLC52A2 OPLAH PPP1R16A SLC39A4 GRINA SCX ADCK5 TMEM249 CYHR1 HSF1 SPATC1 FBXL6 MIR6846 GPT MFSD3 TONSL-AS1 SMPD5 MROH1 SHARPIN LOC101928953 VPS28 GPAA1 LOC101928902 MIR939 CPSF1 BOP1 CYC1 MIR6847 LRRC14 MIR6849 MIR6848 SCRT1 FOXH1 DGAT1 MIR7112 WDR97 EXOSC4 MAF1
nsv6446 Chr.8:144012529 - 144050050 on Build GRCh38 Insertion SMPD5 SPATC1
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss PLEC SMPD5 SHARPIN PARP10 GPAA1 CYC1 MIR6847 OPLAH GRINA WDR97 EXOSC4 SPATC1 MIR6846 MAF1
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion MIR661 PLEC SMPD5 SHARPIN PARP10 EPPK1 GPAA1 CYC1 MIR6847 OPLAH GRINA WDR97 EXOSC4 SPATC1 MIR6846 MAF1
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion LOC642574 MIR6845 MIR661 PLEC SMPD5 NRBP2 PARP10 EPPK1 MIR937 MIR6847 OPLAH PUF60 GRINA EXOSC4 SPATC1 MIR6846 SCRIB
nsv612916 Chr.8:144044224 - 144056712 on Build GRCh38 Loss SMPD5 OPLAH SPATC1
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss HGH1 SMPD5 MROH1 SHARPIN GPAA1 CYC1 MIR6847 OPLAH WDR97 EXOSC4 SPATC1 MIR6846 MAF1
nsv612917 Chr.8:144045204 - 144063598 on Build GRCh38 Loss SMPD5 OPLAH SPATC1 MIR6846
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss MIR1234 MIR661 HGH1 PLEC RECQL4 TONSL PARP10 MIR6893 KIFC2 SLC52A2 OPLAH PPP1R16A SLC39A4 GRINA SCX ADCK5 TMEM249 CYHR1 HSF1 SPATC1 FBXL6 MIR6846 GPT MFSD3 TONSL-AS1 SMPD5 MROH1 SHARPIN LOC101928953 VPS28 GPAA1 LOC101928902 MIR939 CPSF1 BOP1 CYC1 MIR6847 LRRC14 MIR6849 MIR6848 SCRT1 FOXH1 DGAT1 MIR7112 WDR97 EXOSC4 MAF1
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss MIR661 HGH1 PLEC SMPD5 MROH1 SHARPIN PARP10 EPPK1 GPAA1 CYC1 MIR6847 OPLAH GRINA WDR97 EXOSC4 SPATC1 MIR6846 MAF1
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain MIR1234 C8orf82 LRRC24 HGH1 RECQL4 TONSL MIR6893 KIFC2 SLC52A2 OPLAH PPP1R16A SLC39A4 SCX ADCK5 TMEM249 CYHR1 HSF1 SPATC1 FBXL6 MIR6846 GPT MFSD3 TONSL-AS1 SMPD5 MROH1 SHARPIN LOC101928953 ARHGAP39 VPS28 GPAA1 LOC101928902 MIR939 CPSF1 BOP1 CYC1 MIR6847 ZNF251 LRRC14 MIR6849 MIR6848 SCRT1 FOXH1 DGAT1 MIR7112 WDR97 EXOSC4 MAF1
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain CYC1 MIR6847 MIR661 PLEC SMPD5 OPLAH GRINA PARP10 EXOSC4 GPAA1 SPATC1 MIR6846
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain MIR661 PLEC SMPD5 SHARPIN PARP10 GPAA1 CYC1 MIR6847 OPLAH GRINA WDR97 EXOSC4 SPATC1 MIR6846 MAF1
nsv612906 Chr.8:143917935 - 144090784 on Build GRCh38 Loss MIR6847 MIR661 PLEC SMPD5 OPLAH GRINA PARP10 EXOSC4 GPAA1 SPATC1 MIR6846

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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