Genomic Map
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Target Gene Details
Entrez Gene ID: | 9798 |
Gene Name: | IST1, ESCRT-III associated factor |
Gene Aliases: |
OLC1 |
Location: |
Chr.16:71894408-71930639 on Build GRCh38 |
Assay Gene Location: | Within Exon 12 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| IST1 | NM_001270975.1 | 10 | 2400 | NP_001257904.1 |
| NM_001270976.1 | 11 | 2515 | NP_001257905.1 | |
| NM_001270977.1 | 9 | 2307 | NP_001257906.1 | |
| NM_001270978.1 | 7 | 2028 | NP_001257907.1 | |
| NM_001270979.1 | 6 | 1944 | NP_001257908.1 | |
| NM_014761.3 | 10 | 2396 | NP_055576.2 | |
| AB097052.1 | BAC77405.1 | |||
| AK057902.1 | ||||
| AL355695.1 | ||||
| BC000116.1 | AAH00116.1 | |||
| BC000430.2 | AAH00430.1 | |||
| BC004359.1 | AAH04359.1 | |||
| BC103745.1 | AAI03746.1 | |||
| D79996.1 | BAA11491.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1055854 | Chr.16:71888241 - 72048987 on Build GRCh38 | Loss |
 DHODH
IST1
TXNL4B
PKD1L3
|
| nsv977999 | Chr.16:71928060 - 71929060 on Build GRCh38 | Duplication |
IST1
|
| nsv1862 | Chr.16:71900888 - 71935083 on Build GRCh38 | Insertion |
IST1
PKD1L3
|
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Additional Information:
For this assay, SNP(s) [rs142217247] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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