Hs02485352_cn

• Gene Symbol: CPEB2
• Assay Reference Genome Location: Chr.4:15067214 on build GRCh38
• Cytoband: 4p15.32

Target Gene Details

• Entrez Gene ID: 132864
• Gene Name: cytoplasmic polyadenylation element binding protein 2
• Gene Aliases: CPE-BP2, CPEB-2, hCPEB-2
• Location: Chr.4:15002451-15070153 on Build GRCh38
• Assay Gene Location: Within Exon 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CPEB2	NM_001177381.1	11	3858	NP_001170852.1
	NM_001177382.1	12	3939	NP_001170853.1
	NM_001177383.1	11	3849	NP_001170854.1
	NM_001177384.1	10	3834	NP_001170855.1
	NM_182485.2	11	3915	NP_872291.2
	NM_182646.2	10	3825	NP_872587.2
	XM_005248135.3	12	4171	XP_005248192.2
	XM_011513777.2	11	4147	XP_011512079.1
	XM_017007733.1	12	2307	XP_016863222.1
	XM_017007734.1	12	2308	XP_016863223.1
	BC103939.1	12	2530
	BC103940.1	11	2653	AAI03941.1
	BC103941.1	11	2590	AAI03942.1
	BC103942.1	13	2611	AAI03943.1
	BC105925.1	10	2572	AAI05926.1
	BI857384.1	1	216
	BX640753.1	2	1092	CAE45860.1

Target Gene Details

• Entrez Gene ID: 101929095
• Gene Name: uncharacterized LOC101929095
• Gene Aliases: -
• Location: Chr.4:15004942-15427914 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101929095	NR_125911.1
	DB497821.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv829868	Chr.4:14962935 - 15163082 on Build GRCh38	Gain	CPEB2-AS1 CPEB2 LOC101929095
nsv461280	Chr.4:14960872 - 15079750 on Build GRCh38	Loss	CPEB2-AS1 CPEB2 LOC101929095

More Information

Additional Information:

For this assay, SNP(s) [rs141127740] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA polyadenylation factor

Gene Ontology Categories:

Process(es)

translation
cellular response to insulin stimulus
negative regulation of GTPase activity
cellular response to oxidative stress
cellular response to arsenic-containing substance
cellular response to hypoxia
negative regulation of cytoplasmic translational elongation
negative regulation of cytoplasmic translation

Function(s)

nucleotide binding
translation repressor activity, nucleic acid binding
mRNA 3'-UTR binding
GTPase inhibitor activity
translation factor activity, RNA binding
mRNA 3'-UTR AU-rich region binding
ribosome binding
ribosomal large subunit binding
ribosomal small subunit binding
poly(A) RNA binding