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See other IER3 CNV Assays ›
Gene Symbol
IER3
Assay Reference Genome
Location

Chr.6:30744451 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02485522_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8870

Gene Name:

 immediate early response 3

Gene Aliases:

 DIF-2, DIF2, GLY96, IEX-1, IEX-1L, IEX1, PRG1

Location:

 Chr.6:30743199-30744550 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IER3 NM_003897.3 1 100 NP_003888.2
AF039067.1 1 68 AAC32558.1
AF083421.1 1 74 AAC33793.1
AK222588.1 1 97 BAD96308.1
AK314162.1 1 101
BC000844.2 1 84 AAH00844.1
BC005080.1 1 86 AAH05080.1
BM915952.1 1 105
BT006703.1 1 68 AAP35349.1
DA893782.1 1 101
S81914.1 1 86 AAB36278.1
Y14551.1 1 79 CAA74886.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss C6orf136 ATAT1 PPP1R18 ABCF1 MDC1 TUBB PPP1R10 HCG20 MRPS18B FLOT1 IER3 MDC1-AS1 NRM DHX16
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion OR10C1 OR12D3 TRIM15 HLA-F-AS1 TUBB SFTA2 C6orf15 DPCR1 TRIM40 TRIM39 MRPS18B HLA-K LOC554223 RPP21 OR2H2 NRM HCG4B HLA-B OR12D2 OR2J2 C6orf136 ZNRD1 ATAT1 MIR4640 HCG22 VARS2 ABCF1 PSORS1C1 MAS1L HCG8 LINC00243 SNORD32B HCG27 HCG18 FLOT1 LOC105375014 TRIM10 LOC101929006 HLA-C ZNRD1ASP RNF39 GTF2H4 MUC21 GABBR1 CCHCR1 PRR3 HLA-F OR2H1 TRIM39-RPP21 PPP1R18 ZFP57 MDC1 MIR877 HCG20 TRIM31-AS1 TRIM26 OR5V1 PSORS1C2 HCG17 IER3 HLA-E HLA-L HLA-H CDSN UBD DHX16 HCG9 OR14J1 IFITM4P MIR6891 PPP1R11 MICA PPP1R10 POU5F1 OR11A1 MOG MDC1-AS1 HLA-J GNL1 PSORS1C3 MUC22 LINC01015 DDR1 TRIM31 HLA-G HLA-A HCG4 TCF19
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss PPP1R18 MDC1 MIR877 TUBB HCG20 SFTA2 C6orf15 PSORS1C2 DPCR1 MRPS18B IER3 HLA-E NRM CDSN DHX16 C6orf136 ATAT1 MIR4640 HCG22 VARS2 ABCF1 PSORS1C1 PPP1R10 LINC00243 POU5F1 HCG27 FLOT1 LOC105375014 MDC1-AS1 GNL1 PSORS1C3 HLA-C MUC22 GTF2H4 DDR1 MUC21 CCHCR1 TCF19 PRR3
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion OR10C1 OR12D3 TRIM15 HLA-F-AS1 TUBB LINC00533 SFTA2 C6orf15 DPCR1 TRIM40 TRIM39 MRPS18B ZNF311 HLA-K LOC554223 RPP21 OR2H2 NRM HCG4B OR12D2 OR2J2 C6orf136 ZNRD1 ATAT1 MIR4640 OR2J3 OR2B3 HCG22 VARS2 ABCF1 PSORS1C1 MAS1L HCG8 LINC00243 SNORD32B HCG27 HCG18 FLOT1 LOC105375014 HCG14 TRIM10 LOC101929006 ZNRD1ASP RNF39 GTF2H4 MUC21 OR2W1 GABBR1 CCHCR1 PRR3 HLA-F OR2H1 TRIM39-RPP21 PPP1R18 LINC01556 ZFP57 MDC1 MIR877 LINC01623 HCG20 TRIM31-AS1 TRIM26 OR5V1 PSORS1C2 HCG17 IER3 HCG16 HLA-E HLA-L HLA-H CDSN UBD DHX16 HCG9 OR14J1 IFITM4P TRIM27 PPP1R11 PPP1R10 POU5F1 OR11A1 MOG MDC1-AS1 HLA-J GNL1 PSORS1C3 LOC100129636 MUC22 LINC01015 DDR1 TRIM31 HLA-G HLA-A HCG4 TCF19
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion TRIM15 HLA-F-AS1 TUBB SFTA2 C6orf15 DPCR1 TRIM40 TRIM39 MRPS18B HLA-K LOC554223 RPP21 NRM HCG4B C6orf136 ZNRD1 ATAT1 MIR4640 HCG22 VARS2 ABCF1 PSORS1C1 HCG8 LINC00243 HCG27 HCG18 FLOT1 LOC105375014 TRIM10 HLA-C ZNRD1ASP RNF39 GTF2H4 MUC21 CCHCR1 PRR3 HLA-F TRIM39-RPP21 PPP1R18 MDC1 MIR877 HCG20 TRIM31-AS1 TRIM26 PSORS1C2 HCG17 IER3 HLA-E HLA-L HLA-H CDSN DHX16 HCG9 IFITM4P PPP1R11 PPP1R10 POU5F1 MDC1-AS1 HLA-J GNL1 PSORS1C3 MUC22 DDR1 TRIM31 HLA-G HLA-A HCG4 TCF19
esv2759413 Chr.6:30676916 - 30848542 on Build GRCh38 Loss MDC1-AS1 PPP1R18 NRM MDC1 TUBB LINC00243 HCG20 FLOT1 LOC105375014 IER3
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion PPP1R18 MDC1 MIR877 TUBB HCG20 SFTA2 C6orf15 PSORS1C2 DPCR1 MRPS18B IER3 HLA-E NRM CDSN DHX16 C6orf136 ATAT1 MIR4640 HCG22 VARS2 ABCF1 PSORS1C1 PPP1R10 LINC00243 POU5F1 HCG27 FLOT1 LOC105375014 MDC1-AS1 GNL1 PSORS1C3 HLA-C MUC22 GTF2H4 DDR1 MUC21 CCHCR1 TCF19 PRR3
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss TRIM15 TUBB SFTA2 C6orf15 DPCR1 TRIM40 TRIM39 MRPS18B HLA-K RPP21 NRM HCG4B C6orf136 ZNRD1 ATAT1 MIR4640 HCG22 VARS2 ABCF1 PSORS1C1 HCG8 LINC00243 HCG27 HCG18 FLOT1 LOC105375014 TRIM10 HLA-C ZNRD1ASP RNF39 GTF2H4 MUC21 CCHCR1 PRR3 TRIM39-RPP21 PPP1R18 MDC1 MIR877 HCG20 TRIM31-AS1 TRIM26 PSORS1C2 HCG17 IER3 HLA-E HLA-L HLA-H CDSN DHX16 HCG9 PPP1R11 PPP1R10 POU5F1 MDC1-AS1 HLA-J GNL1 PSORS1C3 MUC22 DDR1 TRIM31 HLA-A TCF19
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion PPP1R18 MDC1 MIR877 TUBB HCG20 SFTA2 DPCR1 MRPS18B IER3 NRM DHX16 C6orf136 ATAT1 MIR4640 HCG22 VARS2 ABCF1 PPP1R10 LINC00243 FLOT1 LOC105375014 MDC1-AS1 GNL1 MUC22 GTF2H4 DDR1 MUC21 PRR3
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication TRIM15 TUBB SFTA2 C6orf15 DPCR1 TRIM40 TRIM39 MRPS18B RPP21 NRM HLA-B C6orf136 ZNRD1 ATAT1 MIR4640 HCG22 VARS2 ABCF1 PSORS1C1 HCG8 LINC00243 HCG27 HCG18 FLOT1 LOC105375014 TRIM10 HCP5 HLA-C ZNRD1ASP RNF39 GTF2H4 MUC21 CCHCR1 PRR3 TRIM39-RPP21 PPP1R18 MDC1 MIR877 HCG20 TRIM31-AS1 TRIM26 PSORS1C2 HCG17 IER3 LOC102725068 HLA-E HLA-L CDSN DHX16 MIR6891 PPP1R11 MICA PPP1R10 POU5F1 MDC1-AS1 HLA-J GNL1 PSORS1C3 MUC22 HCG26 DDR1 TRIM31 TCF19
esv3576135 Chr.6:30726039 - 30783224 on Build GRCh38 Gain HCG20 FLOT1 IER3

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