Hs02488907_cn

• Gene Symbol: ATG3
• Assay Reference Genome Location: Chr.3:112538137 on build GRCh38
• Cytoband: 3q13.2

Target Gene Details

• Entrez Gene ID: 64422
• Gene Name: autophagy related 3
• Gene Aliases: APG3, APG3-LIKE, APG3L, PC3-96
• Location: Chr.3:112532507-112561963 on Build GRCh38
• Assay Gene Location: Overlaps Intron 7 - Intron 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ATG3	NM_001278712.1			NP_001265641.1
	NM_022488.4			NP_071933.2
	XM_011513074.1			XP_011511376.1
	AB079384.1			BAB90843.1
	AF202092.1			AAG35611.1
	AK025778.1			BAB15237.1
	AK307432.1
	AK308919.1
	AL137515.1			CAB70781.1
	BC002830.1			AAH02830.1
	BC024221.2			AAH24221.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv591293	Chr.3:112266260 - 113293950 on Build GRCh38	Loss	SLC9C1 CCDC80 CD200 LOC107986113 CFAP44 SLC35A5 ATG3 NEPRO LINC01279 BTLA LOC100129297 CD200R1 BOC LOC101929694 LOC105374042 LOC101929717 GTPBP8 CD200R1L
dgv4840n100	Chr.3:112407084 - 112559957 on Build GRCh38	Gain	ATG3 BTLA
nsv1005323	Chr.3:112453143 - 112555766 on Build GRCh38	Gain	ATG3 BTLA
nsv591301	Chr.3:112533685 - 112613782 on Build GRCh38	Loss	CCDC80 SLC35A5 ATG3 LINC01279
nsv591300	Chr.3:112425179 - 112552010 on Build GRCh38	Gain	ATG3 BTLA

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

autophagosome assembly
mitophagy
cellular protein modification process
protein targeting to membrane
macroautophagy
protein ubiquitination
mitochondrial fragmentation involved in apoptotic process
nucleophagy
regulation of cilium assembly

Function(s)

protein binding
ligase activity
Atg8 ligase activity
Atg12 transferase activity
ubiquitin-like protein transferase activity
enzyme binding