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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49708869 on build GRCh38
Cytoband
19q13.33
Assay ID Hs02496648_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 17 - Intron 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AB208884.1 BAD92121.1
AF357970.1 AAL99615.1
AK074389.1 BAB85068.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
AL831876.1 CAD38561.2
BC029104.1 AAH29104.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss BCL2L12 IRF3 NOSIP MIR5088 PRMT1 PRRG2 PRR12 RRAS ADM5 CPT1C SCAF1
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss BCL2L12 IRF3 NOSIP MIR5088 PRMT1 PRRG2 PRR12 RRAS ADM5 CPT1C SCAF1
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss ATF5 FCGRT MIR4324 TEAD2 SNAR-C1 SNAR-A8 LOC101928295 TULP2 SNAR-G1 CGB1 RPL13A FGF21 BCL2L12 FTL SNAR-A14 FUZ SNAR-A5 CGB8 VRK3 LOC105447645 SNAR-C4 IRF3 SPACA4 PTOV1 NUP62 RPL18 GYS1 BSPH1 CGB3 PTOV1-AS1 PNKP NTF4 PPFIA3 MAMSTR KCNJ14 SNAR-A12 LOC105372430 SNAR-A6 SNAR-G2 AP2A1 PPP1R15A SNAR-A4 DKKL1 SNORD35B SNAR-B2 ZNF114 SNAR-A7 SNAR-A13 NOSIP GRWD1 CGB5 SNAR-A9 SYNGR4 TBC1D17 IL4I1 LOC100287477 CABP5 FLT3LG HRC PLA2G4C CGB2 RCN3 SNAR-A10 RASIP1 CD37 SNAR-A1 SLC6A16 TMEM143 SULT2B1 LOC101059948 MIR4750 SNAR-C3 MIR150 ALDH16A1 SIGLEC11 CA11 CGB7 AKT1S1 NTN5 DHDH FUT2 ELSPBP1 SLC17A7 IZUMO1 GFY DBP MIR4751 NUCB1 MIR6799 SNAR-A3 C19orf73 SNRNP70 HSD17B14 ADM5 SNORD33 CCDC114 LHB FLJ26850 EMP3 MIR5088 TRPM4 CARD8-AS1 SEC1P SNAR-C5 NUCB1-AS1 PLA2G4C-AS1 CARD8 MIR6798 PTOV1-AS2 PTH2 ZNF473 C19orf68 RPS11 BCAT2 SNORD35A LMTK3 SIGLEC16 MED25 SNORD32A SNAR-D PIH1D1 FAM83E LIN7B MIR6800 SNORD34 GRIN2D CCDC155 RRAS RUVBL2 FUT1 SNAR-B1 KCNA7 SNAR-A2 SPHK2 LIG1 SNAR-A11 KDELR1 PRMT1 PRRG2 SNAR-C2 PRR12 CYTH2 TSKS CPT1C PLEKHA4 MIR4749 SCAF1 BAX
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain BCL2L12 IRF3 MIR5088 PRMT1 PRR12 RRAS ADM5 CPT1C SCAF1
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion PTOV1-AS2 ATF5 PTOV1-AS1 PNKP MIR4750 AKT1S1 MED25 AP2A1 BCL2L12 MIR6800 MIR4751 NOSIP MIR6799 FUZ RRAS ADM5 IRF3 PTOV1 NUP62 MIR5088 TBC1D17 IL4I1 PRMT1 PRRG2 PRR12 TSKS CPT1C MIR4749 SCAF1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain BCL2L12 IRF3 NOSIP MIR5088 PRMT1 PRRG2 PRR12 RRAS ADM5 CPT1C SCAF1
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion FCGRT PTOV1-AS1 RPS11 MIR150 SNORD35A MED25 AP2A1 SNORD32A RPL13A SNORD35B BCL2L12 MIR6800 SNORD34 NOSIP MIR6799 FUZ RRAS ADM5 SNORD33 IRF3 MIR5088 PRMT1 PRRG2 PRR12 TSKS CPT1C SCAF1 RCN3

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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