Hs02500222_cn

• Gene Symbol: HNRNPCL1
• Assay Reference Genome Location: Chr.1:12848669 on build GRCh38
• Cytoband: 1p36.21

Target Gene Details

• Entrez Gene ID: 343069
• Gene Name: heterogeneous nuclear ribonucleoprotein C-like 1
• Gene Aliases: HNRPCL1
• Location: Chr.1:12847377-12848756 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HNRNPCL1	NM_001013631.2			NP_001013653.1
	BC002696.2			AAH02696.1
	BC137258.1
	BX283835.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2743853	Chr.1:12811195 - 12933481 on Build GRCh38	Deletion	PRAMEF11 PRAMEF10 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF2
nsv460350	Chr.1:12820292 - 12854043 on Build GRCh38	Loss	PRAMEF11 HNRNPCL1
esv2743875	Chr.1:12832230 - 12849647 on Build GRCh38	Deletion	HNRNPCL1
esv990214	Chr.1:12781664 - 12891244 on Build GRCh38	Gain	PRAMEF11 PRAMEF4 HNRNPCL1 PRAMEF1 PRAMEF2
dgv16n67	Chr.1:12837911 - 12860333 on Build GRCh38	Gain	HNRNPCL1 PRAMEF2
nsv945774	Chr.1:12774773 - 12901520 on Build GRCh38	Duplication	PRAMEF11 PRAMEF12 PRAMEF10 PRAMEF4 HNRNPCL1 PRAMEF1 PRAMEF2
nsv470695	Chr.1:12760937 - 12854042 on Build GRCh38	Loss	PRAMEF11 PRAMEF12 HNRNPCL1 PRAMEF1 C1orf158
nsv999194	Chr.1:12802183 - 12954384 on Build GRCh38	Gain	PRAMEF11 PRAMEF10 PRAMEF6 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF2
nsv1002419	Chr.1:12802093 - 12858224 on Build GRCh38	Gain	PRAMEF11 HNRNPCL1 PRAMEF2
dgv7e214	Chr.1:12841517 - 12861395 on Build GRCh38	Gain	HNRNPCL1 PRAMEF2
dgv7n111	Chr.1:12779433 - 12953291 on Build GRCh38	Deletion	PRAMEF11 PRAMEF10 PRAMEF6 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF1 PRAMEF2
nsv1075770	Chr.1:12827640 - 12869079 on Build GRCh38	Duplication	PRAMEF11 HNRNPCL1 PRAMEF2
nsv2965	Chr.1:12810402 - 13118434 on Build GRCh38	Deletion	PRAMEF11 PRAMEF6 PRAMEF7 PRAMEF4 PRAMEF25 PRAMEF27 HNRNPCL2 PRAMEF10 HNRNPCL3 HNRNPCL1 PRAMEF34P PRAMEF2 PRAMEF22
esv3891748	Chr.1:12790393 - 12901188 on Build GRCh38	Gain+Loss	PRAMEF11 PRAMEF10 PRAMEF4 HNRNPCL1 PRAMEF1 PRAMEF2
esv28644	Chr.1:12780465 - 13050020 on Build GRCh38	Gain+Loss	PRAMEF11 PRAMEF10 PRAMEF6 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF1 PRAMEF2 PRAMEF27 PRAMEF22
nsv8768	Chr.1:12786012 - 13382061 on Build GRCh38	Gain+Loss	PRAMEF18 PRAMEF7 PRAMEF9 PRAMEF19 PRAMEF27 HNRNPCL2 PRAMEF10 PRAMEF5 PRAMEF36P PRAMEF1 PRAMEF22 PRAMEF11 PRAMEF8 PRAMEF6 PRAMEF26 PRAMEF33P PRAMEF4 PRAMEF25 PRAMEF13 HNRNPCL4 PRAMEF14 HNRNPCL3 HNRNPCL1 PRAMEF34P PRAMEF2 PRAMEF15
nsv545457	Chr.1:12786855 - 12893912 on Build GRCh38	Loss	PRAMEF11 PRAMEF10 PRAMEF4 HNRNPCL1 PRAMEF1 PRAMEF2
dgv117n54	Chr.1:12775725 - 12858819 on Build GRCh38	Gain+Loss	PRAMEF11 PRAMEF12 HNRNPCL1 PRAMEF1 PRAMEF2
dgv33n100	Chr.1:12792599 - 12855993 on Build GRCh38	Loss	PRAMEF11 HNRNPCL1 PRAMEF1
nsv436469	Chr.1:12833396 - 12888931 on Build GRCh38	Deletion	PRAMEF4 HNRNPCL1 PRAMEF2
dgv6n111	Chr.1:12771339 - 12923686 on Build GRCh38	Duplication	PRAMEF11 PRAMEF12 PRAMEF10 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF1 PRAMEF2
nsv545445	Chr.1:12714996 - 12854043 on Build GRCh38	Gain	PRAMEF11 PRAMEF12 HNRNPCL1 PRAMEF1 AADACL3 C1orf158
dgv127n54	Chr.1:12815282 - 12859212 on Build GRCh38	Loss	PRAMEF11 HNRNPCL1 PRAMEF2
dgv6e214	Chr.1:12818031 - 12888946 on Build GRCh38	Loss	PRAMEF11 PRAMEF4 HNRNPCL1 PRAMEF2
dgv1n64	Chr.1:12805784 - 12854043 on Build GRCh38	Loss	PRAMEF11 HNRNPCL1
nsv470696	Chr.1:12800601 - 12854042 on Build GRCh38	Gain	PRAMEF11 HNRNPCL1
dgv131n54	Chr.1:12839881 - 12864757 on Build GRCh38	Loss	HNRNPCL1 PRAMEF2
nsv820528	Chr.1:12833212 - 13044394 on Build GRCh38	Deletion	PRAMEF10 PRAMEF6 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF2 PRAMEF22
dgv129n54	Chr.1:12830906 - 12954384 on Build GRCh38	Loss	PRAMEF11 PRAMEF10 PRAMEF6 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF2
esv2669351	Chr.1:12793716 - 12859498 on Build GRCh38	Deletion	PRAMEF11 HNRNPCL1 PRAMEF1 PRAMEF2
esv3585246	Chr.1:12836585 - 12869005 on Build GRCh38	Loss	HNRNPCL1 PRAMEF2
dgv14n67	Chr.1:12786591 - 12860185 on Build GRCh38	Gain	PRAMEF11 HNRNPCL1 PRAMEF1 PRAMEF2
nsv832869	Chr.1:12747525 - 12954384 on Build GRCh38	Gain+Loss	PRAMEF11 PRAMEF12 PRAMEF10 PRAMEF6 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF1 PRAMEF2 C1orf158
dgv6e201	Chr.1:12830768 - 12888583 on Build GRCh38	Deletion	PRAMEF11 PRAMEF4 HNRNPCL1 PRAMEF2
dgv27n100	Chr.1:12785708 - 12858224 on Build GRCh38	Gain+Loss	PRAMEF11 HNRNPCL1 PRAMEF1 PRAMEF2
nsv1161105	Chr.1:12792723 - 12850124 on Build GRCh38	Deletion	PRAMEF11 HNRNPCL1 PRAMEF1
esv32750	Chr.1:12786801 - 13075119 on Build GRCh38	Gain	PRAMEF11 PRAMEF10 HNRNPCL3 PRAMEF6 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF1 PRAMEF25 PRAMEF2 PRAMEF27 PRAMEF22
esv3585241	Chr.1:12794746 - 12859339 on Build GRCh38	Loss	PRAMEF11 HNRNPCL1 PRAMEF1 PRAMEF2
dgv5n27	Chr.1:12774110 - 12854043 on Build GRCh38	Gain	PRAMEF11 PRAMEF12 HNRNPCL1 PRAMEF1
esv2743920	Chr.1:12844726 - 12849657 on Build GRCh38	Deletion	HNRNPCL1
nsv1161165	Chr.1:12823122 - 12923686 on Build GRCh38	Duplication	PRAMEF11 PRAMEF10 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF2
dgv13n67	Chr.1:12779834 - 12849702 on Build GRCh38	Loss	PRAMEF11 HNRNPCL1 PRAMEF1
dgv114n54	Chr.1:12764075 - 12852235 on Build GRCh38	Gain	PRAMEF11 PRAMEF12 HNRNPCL1 PRAMEF1
nsv433182	Chr.1:12820494 - 12901196 on Build GRCh38	Loss	PRAMEF11 PRAMEF10 PRAMEF4 HNRNPCL1 PRAMEF2
esv3891414	Chr.1:12794693 - 13048420 on Build GRCh38	Gain+Loss	PRAMEF11 PRAMEF10 PRAMEF6 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF1 PRAMEF2 PRAMEF22
dgv20n100	Chr.1:12774425 - 12858224 on Build GRCh38	Loss	PRAMEF11 PRAMEF12 HNRNPCL1 PRAMEF1 PRAMEF2
nsv1010920	Chr.1:12806942 - 12858224 on Build GRCh38	Gain+Loss	PRAMEF11 HNRNPCL1 PRAMEF2
esv2678231	Chr.1:12838775 - 12953515 on Build GRCh38	Deletion	PRAMEF10 PRAMEF6 PRAMEF7 PRAMEF4 HNRNPCL1 PRAMEF2
dgv130n54	Chr.1:12834668 - 12864107 on Build GRCh38	Loss	HNRNPCL1 PRAMEF2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

nucleotide binding
poly(A) RNA binding