Hs02523662_cn

• Gene Symbol: CCNF
• Assay Reference Genome Location: Chr.16:2445470 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 899
• Gene Name: cyclin F
• Gene Aliases: FBX1, FBXO1
• Location: Chr.16:2425438-2458858 on Build GRCh38
• Assay Gene Location: Overlaps Intron 10 - Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CCNF	NM_001323538.1			NP_001310467.1
	NM_001761.2			NP_001752.2
	XM_017023822.1			XP_016879311.1
	XM_017023823.1			XP_016879312.1
	AB208829.1			BAD92066.1
	AK313371.1
	BC012349.1			AAH12349.1
	U17105.1			AAB60342.1
	Z36714.1			CAA85308.1

Target Gene Details

• Entrez Gene ID: 102465459
• Gene Name: microRNA 6767
• Gene Aliases: hsa-mir-6767
• Location: Chr.16:2445392-2445457 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR6767	NR_106825.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	CRAMP1 CEMP1 C16orf91 SNORA78 FLJ42627 MLST8 RAB26 RPL23AP5 HN1L FBXL16 TPSB2 HAGH RPUSD1 MPG MIR3177 ZNF598 GNG13 CCDC78 PTX4 MSRB1 WASIR2 BAIAP3 ABCA17P METTL26 DNASE1L2 PDIA2 HS3ST6 NME4 E4F1 ECI1 PRR25 MRPS34 LMF1-AS1 MCRIP2 MIR6511B1 HBZ PIGQ PDPK1 MIR4717 CASKIN1 NUBP2 MIR4516 WDR24 SNHG19 LOC105371038 RPL3L NHLRC4 NDUFB10 MEIOB ABCA3 SNHG9 TMEM204 MIR6768 C16orf59 AXIN1 DDX11L10 C1QTNF8 TRAF7 LOC100134368 SNORD60 CHTF18 MIR6859-4 TSC2 CLCN7 HBQ1 PRSS27 NPRL3 FAHD1 LINC00235 SNORA64 UNKL MIR1225 MIR3176 RGS11 LINC00254 LOC106660606 LOC107984876 TELO2 LUC7L NTHL1 STUB1 LOC105371046 SYNGR3 CACNA1H POLR3K LOC101929280 NPW MRPL28 CAPN15 MAPK8IP3 CCNF SOX8 SPSB3 WDR90 TPSAB1 RHBDF1 SNORA10 JMJD8 CCDC154 TBC1D24 RNPS1 ATP6V0C MIR5587 NARFL TMEM8A LOC729652 RAB11FIP3 RPS2 TPSG1 MIR3178 METRN MIR940 NOXO1 HBM RNF151 HAGHL SSTR5 LOC105371184 LOC105371049 TSR3 LOC105371045 IGFALS TBL3 HBA2 PRR35 ERVK13-1 SSTR5-AS1 GFER MSLN MIR662 FAM173A PKD1 BRICD5 LOC100287175 EME2 SNRNP25 HBA1 GNPTG TPSD1 MIR3180-5 FAM234A RHOT2 LOC652276 RAB40C MIR6767 UBE2I WFIKKN1 LMF1 NME3 MIR3677 KCTD5 SLC9A3R2 PRSS29P PGP LOC107987233 LOC105371047 IFT140 AMDHD2 NTN3 RHBDL1 DECR2 ARHGDIG
nsv952903	Chr.16:2423400 - 2476599 on Build GRCh38	Deletion	MIR6767 TBC1D24 MIR6768 C16orf59 NTN3 CCNF LOC729652 ABCA17P
nsv1052260	Chr.16:2074546 - 2629655 on Build GRCh38	Gain	PDPK1 MIR4717 CEMP1 CASKIN1 MIR4516 CCNF SNHG19 PKD1 BRICD5 MLST8 RAB26 ABCA3 TBC1D24 RNPS1 MIR6768 ATP6V0C C16orf59 MIR3180-5 TRAF7 LOC729652 LOC652276 SNORD60 MIR6767 MIR3178 MIR3677 TSC2 MIR940 ABCA17P PGP DNASE1L2 MIR1225 LOC105371049 E4F1 AMDHD2 ECI1 NTN3 LOC106660606 MIR6511B1
nsv833121	Chr.16:2360975 - 2518228 on Build GRCh38	Loss	MIR6767 TBC1D24 MIR6768 ATP6V0C C16orf59 NTN3 CCNF LOC729652 ABCA17P

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

kinase activator

Gene Ontology Categories:

Process(es)

re-entry into mitotic cell cycle
placenta development
mitotic nuclear division
negative regulation of centrosome duplication
protein ubiquitination
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cell division

Function(s)

protein binding