Hs02528295_cn

• Gene Symbol: TRIM46
• Assay Reference Genome Location: Chr.1:155184942 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 80128
• Gene Name: tripartite motif containing 46
• Gene Aliases: GENEY, TRIFIC
• Location: Chr.1:155173714-155184971 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRIM46	NM_001256599.1			NP_001243528.1
	NM_001256600.1			NP_001243529.1
	NM_001256601.1			NP_001243530.1
	NM_001282378.1			NP_001269307.1
	NM_025058.4			NP_079334.3
	NR_046327.1
	NR_046329.1
	XM_011510002.1			XP_011508304.1
	XM_017002393.1			XP_016857882.1
	AK090504.1
	AK096158.1
	AK128139.1			BAC87293.1
	DB326530.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv527682	Chr.1:155177242 - 155227671 on Build GRCh38	Gain	THBS3 MUC1 MTX1 MIR92B TRIM46 GBAP1
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	THBS3 MUC1 KRTCAP2 MTX1 MIR92B TRIM46 FAM189B GBAP1 SCAMP3 GBA
nsv1010146	Chr.1:155146620 - 155231273 on Build GRCh38	Gain	THBS3 MUC1 KRTCAP2 MTX1 MIR92B TRIM46 GBAP1
nsv2988	Chr.1:155182130 - 155219701 on Build GRCh38	Insertion	THBS3 MUC1 MTX1 MIR92B TRIM46 GBAP1
nsv547961	Chr.1:155109822 - 155225189 on Build GRCh38	Loss	THBS3 MUC1 DPM3 KRTCAP2 MTX1 EFNA1 MIR92B TRIM46 SLC50A1 GBAP1
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	THBS3 DPM3 RUSC1-AS1 ASH1L MTX1 EFNA1 TRIM46 SLC50A1 FAM189B GBAP1 SCAMP3 LOC105371451 MUC1 PKLR KRTCAP2 CLK2 MIR92B RUSC1 GBA HCN3 FDPS

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s)

zinc ion binding