Hs02531928_cn

• Gene Symbol: ST6GALNAC4
• Assay Reference Genome Location: Chr.9:127907883 on build GRCh38
• Cytoband: 9q34.11

Target Gene Details

• Entrez Gene ID: 27090
• Gene Name: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
• Gene Aliases: IV, SIAT3-C, SIAT3C, SIAT7-D, SIAT7D, ST6GALNACIV, ST6GalNAc
• Location: Chr.9:127907886-127917052 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ST6GALNAC4	NM_175039.3			NP_778204.1
	NM_175040.3			NP_778205.1
	XM_011518527.2			XP_011516829.1
	XM_011518529.2			XP_011516831.1
	AK000600.1			BAA91281.1
	AK292049.1	6	1449
	BC036705.2			AAH36705.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv615381	Chr.9:127906678 - 127954482 on Build GRCh38	Loss	PIP5KL1 ST6GALNAC4 DPM2 ST6GALNAC6 FAM102A

More Information

Additional Information:

For this assay, SNP(s) [rs73606489] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

ganglioside biosynthetic process
glycolipid metabolic process
oligosaccharide metabolic process
O-glycan processing
protein N-linked glycosylation via asparagine
sialylation

Function(s)

alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity
sialyltransferase activity
(alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl-galactosaminide 6-alpha-sialyltransferase activity