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See other CHRNE CNV Assays ›
Gene Symbol
CHRNE
Assay Reference Genome
Location

Chr.17:4898270 on build GRCh38
Cytoband
17p13.2
Assay ID Hs02534998_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1145

Gene Name:

 cholinergic receptor nicotinic epsilon subunit

Gene Aliases:

 ACHRE, CMS1D, CMS1E, CMS2A, CMS4A, CMS4B, CMS4C, FCCMS, SCCMS

Location:

 Chr.17:4897769-4905019 on Build GRCh38

Assay Gene Location:

 Within Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHRNE NM_000080.3 12 1959 NP_000071.1
XM_017024115.1 12 1978 XP_016879604.1
X66403.1 12 1959 CAA47030.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833350 Chr.17:4884713 - 5060776 on Build GRCh38 Loss CHRNE MIR6865 MINK1 LOC102724009 KIF1C PFN1 CAMTA2 LOC101927979 SLC52A1 SPAG7 ENO3 C17orf107 RNF167 MIR6864 INCA1 GP1BA SLC25A11
esv3572365 Chr.17:4874864 - 4942141 on Build GRCh38 Gain CHRNE C17orf107 RNF167 MINK1 GP1BA SLC25A11
nsv833349 Chr.17:4853631 - 4991300 on Build GRCh38 Loss CHRNE MIR6865 MINK1 PFN1 CAMTA2 LOC101927979 SPAG7 ENO3 C17orf107 RNF167 MIR6864 INCA1 GP1BA SLC25A11
nsv574275 Chr.17:4875192 - 4946479 on Build GRCh38 Gain CHRNE C17orf107 RNF167 MINK1 PFN1 GP1BA SLC25A11
nsv833347 Chr.17:4785297 - 4955981 on Build GRCh38 Loss CHRNE LOC107984973 MINK1 PFN1 VMO1 GLTPD2 ENO3 C17orf107 RNF167 PLD2 GP1BA SLC25A11 PSMB6
dgv3088n100 Chr.17:4868317 - 4942562 on Build GRCh38 Gain CHRNE C17orf107 RNF167 MINK1 GP1BA SLC25A11
nsv509647 Chr.17:4865132 - 4918672 on Build GRCh38 Insertion CHRNE C17orf107 MINK1
nsv574273 Chr.17:4585589 - 5460332 on Build GRCh38 Gain MED11 USP6 PELP1 LOC101559451 VMO1 CAMTA2 SLC52A1 SPAG7 ENO3 ZNF232 ALOX15 C17orf107 ARRB2 ZMYND15 INCA1 PLD2 LOC400568 CHRNE LOC107984973 MIR6865 SCIMP DHX33 SMTNL2 NUP88 ZFP3 MINK1 LOC100130950 LOC102724009 KIF1C PFN1 RPAIN TM4SF5 LOC101927979 GLTPD2 RABEP1 LOC101928000 RNF167 CXCL16 MIR6864 ZNF594 GP1BA SLC25A11 PSMB6 C1QBP

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