Hs02556173_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63203651 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3	4	583	NP_060268.2
	AK000398.1			BAA91138.1
	AK095795.1	4	301
	AK300073.1	2	313
	BC003681.1	3	257	AAH03681.1
	BC016920.2			AAH16920.2
	BC025264.1	1	120	AAH25264.1
	BC050284.1	4	583	AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	LOC107985425 MIR124-3 YTHDF1 NKAIN4 MIR3196 BIRC7
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	LOC107985425 FNDC11 LOC100130152 SRMS COL20A1 ARFGAP1 YTHDF1 HELZ2 BIRC7 PTK6 LOC100130587 PPDPF LOC102723788 MIR124-3 MIR4326 CHRNA4 FLJ16779 NKAIN4 MIR3196 KCNQ2 EEF1A2
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	LOC63930 MIR124-3 HAR1A YTHDF1 HAR1B
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	LOC107985425 YTHDF1 NKAIN4 MIR3196 BIRC7
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	LOC100130152 SRMS DPH3P1 COL20A1 DIDO1 BIRC7 PTK6 PPDPF LOC102723788 GID8 MIR4326 CHRNA4 FLJ16779 SLC17A9 BHLHE23 COL9A3 HAR1B EEF1A2 LOC107985425 LOC63930 OGFR-AS1 LOC107985428 FNDC11 OGFR MRGBP LINC01056 ARFGAP1 LINC00029 HAR1A YTHDF1 HELZ2 LOC100130587 MIR124-3 GMEB2 NKAIN4 MIR3196 TCFL5 LINC00659 KCNQ2
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	LOC107985425 MIR124-3 YTHDF1 NKAIN4 MIR3196 BIRC7

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding