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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49706077 on build GRCh38
Cytoband
19q13.33
Assay ID Hs02574312_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 14 - Intron 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AB208884.1 BAD92121.1
AF357970.1 AAL99615.1
AK074389.1 BAB85068.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
AL831876.1 CAD38561.2
BC029104.1 AAH29104.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss MIR5088 PRR12 BCL2L12 RRAS PRRG2 IRF3 CPT1C ADM5 PRMT1 NOSIP SCAF1
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss MIR5088 PRR12 BCL2L12 RRAS PRRG2 IRF3 CPT1C ADM5 PRMT1 NOSIP SCAF1
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss CARD8 MIR4751 SNAR-C2 BAX C19orf68 MIR6800 CCDC114 SNAR-A12 MAMSTR MIR4749 RPL13A MIR4324 SNORD32A SNAR-C1 IL4I1 AP2A1 LMTK3 SPHK2 HRC MIR6798 GRIN2D BCAT2 CYTH2 RUVBL2 DKKL1 SNAR-A6 GYS1 MIR150 TSKS SNAR-A8 ATF5 FUT2 SNAR-A11 SNORD34 RRAS NUCB1-AS1 GFY LOC101928295 SNORD33 FGF21 SNAR-A2 BCL2L12 SNAR-A3 RCN3 PNKP PTOV1-AS2 SNAR-G2 BSPH1 SEC1P CD37 PIH1D1 PRRG2 ALDH16A1 SNRNP70 SNAR-A10 CGB7 TULP2 GRWD1 PPFIA3 FTL ADM5 SCAF1 FCGRT MIR5088 SLC6A16 NUCB1 PTOV1 FLJ26850 PLA2G4C SNAR-A13 KCNJ14 HSD17B14 FAM83E PRMT1 SLC17A7 SNAR-A5 LIN7B SIGLEC11 MIR6799 CGB1 EMP3 CCDC155 SNORD35B CA11 NOSIP RPL18 PPP1R15A PTOV1-AS1 TBC1D17 IZUMO1 TRPM4 SNAR-G1 KCNA7 MIR4750 SNAR-D LOC105447645 CABP5 AKT1S1 LOC105372430 C19orf73 LHB DBP SNAR-C3 SNAR-C5 SNAR-C4 RASIP1 SNORD35A FLT3LG SNAR-A9 TMEM143 ZNF473 SYNGR4 CGB8 RPS11 SIGLEC16 KDELR1 SNAR-A7 ZNF114 NTF4 LIG1 CGB3 MED25 PLA2G4C-AS1 NUP62 IRF3 CARD8-AS1 SNAR-A14 SNAR-B2 PTH2 DHDH LOC101059948 VRK3 CPT1C SULT2B1 SNAR-A1 TEAD2 SNAR-A4 PRR12 FUT1 NTN5 SNAR-B1 FUZ SPACA4 CGB2 ELSPBP1 LOC100287477 CGB5 PLEKHA4
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain MIR5088 PRR12 BCL2L12 RRAS IRF3 CPT1C ADM5 PRMT1 SCAF1
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR5088 MIR4751 BCL2L12 PTOV1 MIR6800 PNKP PTOV1-AS2 PRMT1 MIR4749 MED25 IL4I1 AP2A1 MIR6799 NUP62 IRF3 NOSIP PTOV1-AS1 PRRG2 TBC1D17 CPT1C MIR4750 TSKS AKT1S1 ATF5 PRR12 RRAS FUZ ADM5 SCAF1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain MIR5088 PRR12 BCL2L12 RRAS PRRG2 IRF3 CPT1C ADM5 PRMT1 NOSIP SCAF1
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion FCGRT MIR5088 BCL2L12 MIR6800 RCN3 PRMT1 RPL13A SNORD32A MED25 AP2A1 MIR6799 IRF3 SNORD35B NOSIP PTOV1-AS1 PRRG2 CPT1C MIR150 TSKS PRR12 SNORD34 RRAS SNORD33 FUZ ADM5 SNORD35A SCAF1 RPS11

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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