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See other SSC4D CNV Assays ›
Gene Symbol
SSC4D
Assay Reference Genome
Location

Chr.7:76389758 on build GRCh38
Cytoband
7q11.23
Assay ID Hs02577912_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 136853

Gene Name:

 scavenger receptor cysteine rich family member with 4 domains

Gene Aliases:

 S4D-SRCRB, SRCRB-S4D, SRCRB4D

Location:

 Chr.7:76389329-76410025 on Build GRCh38

Assay Gene Location:

 Within Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SSC4D NM_080744.1 11 2377 NP_542782.1
XM_017011750.1 8 2166 XP_016867239.1
AJ312755.1 11 2377 CAC84764.1
AK172783.1 11 2335 BAD18764.1
BC015651.2 4 970 AAH15651.1
BC113840.1 8 1859 AAI13841.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422494 Chr.7:76286900 - 76984449 on Build GRCh38 Duplication YWHAG DTX2P1-UPK3BP1-PMS2P11 FDPSP2 DTX2 LOC105375355 SSC4D POMZP3 ZP3 SRRM3 SPDYE16 LOC100133091 HSPB1
nsv428174 Chr.7:76305019 - 77220062 on Build GRCh38 Gain YWHAG FDPSP2 DTX2 SSC4D POMZP3 ZP3 SPDYE16 FGL2 CCDC146 SPDYE18 DTX2P1-UPK3BP1-PMS2P11 SPDYE17 LOC105375355 LOC100133091 PMS2P9
nsv528969 Chr.7:75074053 - 76920728 on Build GRCh38 Gain MDH2 FDPSP2 LOC541473 STAG3L1 MIR4651 SSC4D POMZP3 SPDYE16 HIP1 PMS2P2 LOC107986711 GTF2IP7 STYXL1 LOC105375355 SRRM3 LOC100133091 PMS2P3 TMEM120A TRIM73 YWHAG DTX2 RHBDD2 GTF2IP1 ZP3 POM121C HSPB1 SNORA14A POR NSUN5P1 PMS2P10 SPDYE5 NCF1C CCL24 GTF2IRD2B LOC441259 CCL26
dgv232e55 Chr.7:76374650 - 77109274 on Build GRCh38 Gain SPDYE18 DTX2P1-UPK3BP1-PMS2P11 SPDYE17 FDPSP2 DTX2 LOC105375355 SSC4D POMZP3 ZP3 SPDYE16 LOC100133091 PMS2P9
dgv233e55 Chr.7:76383349 - 77190972 on Build GRCh38 Loss FDPSP2 DTX2 SSC4D POMZP3 ZP3 SPDYE16 CCDC146 SPDYE18 DTX2P1-UPK3BP1-PMS2P11 SPDYE17 LOC105375355 LOC100133091 PMS2P9
nsv1028665 Chr.7:76336044 - 76445651 on Build GRCh38 Gain YWHAG SSC4D ZP3
dgv120n16 Chr.7:75440769 - 76641919 on Build GRCh38 Deletion MDH2 FDPSP2 MIR4651 SSC4D POMZP3 SPDYE16 HIP1 LOC107986711 GTF2IP7 STYXL1 LOC105375355 SRRM3 LOC100133091 PMS2P3 TMEM120A YWHAG DTX2 RHBDD2 ZP3 POM121C HSPB1 SNORA14A POR SPDYE5 CCL24 CCL26

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)


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