Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 1198 |
Gene Name: | CDC like kinase 3 |
Gene Aliases: |
PHCLK3, PHCLK3/152 |
Location: |
Chr.15:74598476-74645418 on Build GRCh38 |
Assay Gene Location: |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CLK3 | CR933693.1 | 4 | 898 |
Target Gene Details
Entrez Gene ID: | 80153 |
Gene Name: | enhancer of mRNA decapping 3 |
Gene Aliases: |
LSM16, MRT50, YJDC, YJEFN2 |
Location: |
Chr.15:74630558-74696045 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| EDC3 | NM_001142443.1 | 8 | 1360 | NP_001135915.1 |
| NM_001142444.1 | 6 | 1145 | NP_001135916.1 | |
| NM_025083.3 | 5 | 1056 | NP_079359.2 | |
| XM_011522092.2 | 3 | 466 | XP_011520394.1 | |
| AF193058.1 | 6 | 1093 | AAG22486.1 | |
| AK024781.1 | 6 | 1085 | BAB15001.1 | |
| AK056339.1 | 5 | 1056 | ||
| AK225099.1 | 6 | 1085 | ||
| BC011534.1 | 5 | 1030 | AAH11534.1 | |
| BC021271.2 | 8 | 1334 | AAH21271.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv457204 | Chr.15:74592750 - 74655722 on Build GRCh38 | Loss |
 CLK3
EDC3
ARID3B
LOC102723750
|
| nsv817698 | Chr.15:74596822 - 74727108 on Build GRCh38 | Gain |
CYP1A1
CLK3
EDC3
ARID3B
LOC102723750
|
| nsv1121512 | Chr.15:72670085 - 75273877 on Build GRCh38 | Deletion |
UBL7-AS1
LOC101929333
BBS4
RPP25
CSK
C15orf39
HIGD2B
CLK3
MIR6882
C15orf59
LOC729739
GOLGA6A
EDC3
HCN4
CYP1A1
STRA6
NPTN
STOML1
NEO1
NPTN-IT1
CPLX3
ARID3B
LOC102723750
MIR4513
C15orf59-AS1
CD276
ISLR2
SCAMP2
FAM219B
PPCDC
UBL7
REC114
SCAMP5
MPI
GOLGA6C
ISLR
CYP1A2
LMAN1L
PML
LOC732265
CCDC33
CYP11A1
MIR6881
LOXL1
LOXL1-AS1
ADPGK
LOC283731
ADPGK-AS1
COX5A
SEMA7A
LOC107984728
ULK3
LOC105376731
TBC1D21
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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