Hs02613339_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63203761 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AK095795.1
	AK300073.1
	BC003681.1			AAH03681.1
	BC025264.1			AAH25264.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	YTHDF1 MIR124-3 NKAIN4 BIRC7 MIR3196 LOC107985425
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	COL20A1 PTK6 FNDC11 YTHDF1 LOC102723788 SRMS MIR124-3 LOC100130587 MIR4326 NKAIN4 KCNQ2 ARFGAP1 LOC100130152 HELZ2 CHRNA4 EEF1A2 PPDPF BIRC7 MIR3196 LOC107985425 FLJ16779
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	HAR1A LOC63930 HAR1B YTHDF1 MIR124-3
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	YTHDF1 NKAIN4 BIRC7 MIR3196 LOC107985425
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	COL20A1 LOC107985428 FNDC11 DPH3P1 OGFR SRMS MIR4326 LINC00029 BHLHE23 ARFGAP1 HELZ2 MRGBP CHRNA4 DIDO1 OGFR-AS1 SLC17A9 COL9A3 BIRC7 LOC107985425 GID8 HAR1A PTK6 YTHDF1 LOC102723788 MIR124-3 LOC100130587 NKAIN4 KCNQ2 LOC63930 GMEB2 LINC00659 LOC100130152 HAR1B LINC01056 EEF1A2 PPDPF TCFL5 MIR3196 FLJ16779
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	YTHDF1 MIR124-3 NKAIN4 BIRC7 MIR3196 LOC107985425

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding