Hs02620857_cn

• Gene Symbol: SPEF1
• Assay Reference Genome Location: Chr.20:3779298 on build GRCh38
• Cytoband: 20p13

Target Gene Details

• Entrez Gene ID: 25876
• Gene Name: sperm flagellar 1
• Gene Aliases: C20orf28, CLAMP, SPEF1A
• Location: Chr.20:3777504-3781466 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPEF1	NM_015417.4	3	444	NP_056232.2
	XM_005260683.4	3	455	XP_005260740.1
	AK313766.1	3	457
	AL040853.1	1	58
	AL080154.1	3	426	CAB45745.1
	BC022476.1	3	403	AAH22476.1
	BI520334.1	3	443
	DB030684.1	3	457
	DB033051.1	3	437
	EF560745.1	3	442

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833899	Chr.20:3709295 - 3878350 on Build GRCh38	Loss	MAVS CDC25B AP5S1 SIGLEC1 LOC101929125 C20orf27 CENPB HSPA12B SPEF1
nsv828673	Chr.20:3738382 - 4184811 on Build GRCh38	Gain	CDC25B AP5S1 LOC101929125 C20orf27 PANK2 MIR103A2 RNF24 MIR103B2 SMOX MAVS CENPB HSPA12B SPEF1
nsv585286	Chr.20:3747323 - 3803946 on Build GRCh38	Loss	CDC25B C20orf27 CENPB HSPA12B SPEF1
nsv585285	Chr.20:3705789 - 3791211 on Build GRCh38	Loss	CDC25B SIGLEC1 C20orf27 CENPB HSPA12B SPEF1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function
protein binding