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Gene Symbol
CPLX1
Assay Reference Genome
Location

Chr.4:786209 on build GRCh38
Cytoband
4p16.3
Assay ID Hs02622637_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10815

Gene Name:

 complexin 1

Gene Aliases:

 CPX-I, CPX1

Location:

 Chr.4:784957-826157 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPLX1 NM_006651.3 4 888 NP_006642.1
XM_011513391.1 3 819 XP_011511693.1
AB593095.1 4 865
AK126578.1 5 760
BC002471.2 4 888 AAH02471.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1003219 Chr.4:776106 - 1111676 on Build GRCh38 Gain CPLX1 LOC100129917 FGFRL1 TMEM175 IDUA RNF212 SLC26A1 DGKQ GAK
nsv520136 Chr.4:765921 - 787095 on Build GRCh38 Gain CPLX1 PCGF3 LOC100129917
esv2759217 Chr.4:609419 - 937566 on Build GRCh38 Loss CPLX1 PCGF3 LOC107986211 LOC100129917 PDE6B MYL5 LOC101928521 TMEM175 MFSD7 GAK ATP5I
nsv818207 Chr.4:760156 - 827702 on Build GRCh38 Gain CPLX1 PCGF3 LOC107986211 LOC100129917
nsv822425 Chr.4:546316 - 1420011 on Build GRCh38 Loss LOC100130872 LOC107986211 LOC100129917 SPON2 PDE6B MYL5 IDUA DGKQ CTBP1-AS2 CPLX1 TMED11P LOC105374344 LOC101928521 TMEM175 CRIPAK SLC26A1 CTBP1-AS GAK PCGF3 UVSSA MAEA LOC101928548 RNF212 MFSD7 FGFRL1 NKX1-1 CTBP1 ATP5I
nsv521402 Chr.4:777799 - 799975 on Build GRCh38 Loss CPLX1 LOC100129917
nsv950325 Chr.4:620112 - 796912 on Build GRCh38 Deletion CPLX1 PCGF3 LOC107986211 LOC100129917 PDE6B MYL5 LOC101928521 MFSD7 ATP5I
esv3599381 Chr.4:760588 - 838288 on Build GRCh38 Gain CPLX1 PCGF3 LOC107986211 LOC100129917

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More Information


Additional Information:

For this assay, SNP(s) [rs183377679] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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