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See other CLTCL1 CNV Assays ›
Gene Symbol
CLTCL1
Assay Reference Genome
Location

Chr.22:19183464 on build GRCh38
Cytoband
22q11.21
Assay ID Hs02633524_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8218

Gene Name:

 clathrin heavy chain like 1

Gene Aliases:

 CHC22, CLH22, CLTCL, CLTD

Location:

 Chr.22:19179473-19291716 on Build GRCh38

Assay Gene Location:

 Within Exon 31
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CLTCL1 NM_001835.3 29 4657 NP_001826.3
NM_007098.3 30 4828 NP_009029.3
XM_011530401.2 20 3062 XP_011528703.1
XM_017028953.1 30 4821 XP_016884442.1
XM_017028954.1 29 4707 XP_016884443.1
XM_017028955.1 29 4605 XP_016884444.1
XM_017028956.1 28 4539 XP_016884445.1
AK125929.1 1 1368
AK294147.1 7 1030
AK295264.1 9 1310
AK302506.1 29 4626
L77568.1 16 2340
U41763.1 30 4850 AAC50494.1
U60802.1 30 4797 AAB40908.1
X95486.1 30 4786 CAA64752.1
X95487.1 2 234 CAA64753.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv588213 Chr.22:18971102 - 19298293 on Build GRCh38 Gain SLC25A1 DGCR2 CLTCL1 DGCR11 TSSK2 DGCR10 GSC2 DGCR14 DGCR5 DGCR9 LINC01311
esv1007063 Chr.22:19183237 - 19186643 on Build GRCh38 Deletion CLTCL1
nsv834122 Chr.22:19098491 - 19280189 on Build GRCh38 Loss SLC25A1 DGCR2 CLTCL1 TSSK2 GSC2 DGCR14 LINC01311
esv3575418 Chr.22:18161776 - 19963846 on Build GRCh38 Gain DGCR11 TSSK2 DGCR10 SEPT5 LOC642643 LINC00895 CDC45 SEPT5-GP1BB C22orf29 LOC102725072 LOC100996415 HIRA CLTCL1 PRODH C22orf39 TMEM191B CLDN5 LOC100996432 DGCR5 DGCR9 GNB1L LINC01311 GGT3P SLC25A1 LOC729461 FAM230A GSC2 PI4KAP1 TBX1 USP18 DGCR14 GP1BB DGCR2 UFD1L TXNRD2 COMT LOC100996401 MIR4761 DGCR6 RIMBP3 MRPL40
nsv588216 Chr.22:19086099 - 19839117 on Build GRCh38 Gain SLC25A1 TSSK2 SEPT5 GSC2 LINC00895 TBX1 CDC45 DGCR14 GP1BB SEPT5-GP1BB HIRA DGCR2 CLTCL1 UFD1L C22orf39 CLDN5 GNB1L LINC01311 MRPL40

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