Hs02635098_cn

• Gene Symbol: STX5
• Assay Reference Genome Location: Chr.11:62827135 on build GRCh38
• Cytoband: 11q12.3

Target Gene Details

• Entrez Gene ID: 6811
• Gene Name: syntaxin 5
• Gene Aliases: SED5, STX5A
• Location: Chr.11:62806860-62832091 on Build GRCh38
• Assay Gene Location: Overlaps Intron 5 - Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
STX5	NM_001244666.1			NP_001231595.1
	NM_003164.4			NP_003155.2
	XM_011545223.2			XP_011543525.1
	XM_011545224.2			XP_011543526.1
	AK296675.1
	AK313497.1
	BC002645.1			AAH02645.1
	BC012137.1			AAH12137.2
	BT019646.1			AAV38452.1
	BT019647.1			AAV38453.1
	BX537426.1			CAD97668.1
	CB155395.1
	U26648.1			AAC71078.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1159903	Chr.11:62818434 - 62885307 on Build GRCh38	Duplication	SNORD31 SNORD25 SNORD22 SNORD26 SNORD30 SLC3A2 WDR74 SNORD27 SNORD28 SNORD29 STX5 LOC105369332 RNU2-2P SNHG1
nsv508636	Chr.11:62779642 - 62876986 on Build GRCh38	Deletion	MIR6514 TMEM223 MIR6748 SNORD31 SNORD25 TMEM179B SNORD22 SNORD26 SNORD30 SLC3A2 WDR74 SNORD27 SNORD28 NXF1 SNORD29 STX5 LOC105369332 RNU2-2P SNHG1 TAF6L

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Process(es)

intracellular protein transport
ER to Golgi vesicle-mediated transport
vesicle fusion
early endosome to Golgi transport
retrograde transport, endosome to Golgi
positive regulation of protein catabolic process
COPII vesicle coating
vesicle docking
vesicle fusion with Golgi apparatus
Golgi disassembly
cell-cell adhesion
regulation of Golgi organization

Function(s)

SNARE binding
SNAP receptor activity
protein binding
protein N-terminus binding
cadherin binding involved in cell-cell adhesion