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See other PUF60 CNV Assays ›
Gene Symbol
PUF60
Assay Reference Genome
Location

Chr.8:143817004 on build GRCh38
Cytoband
8q24.3
Assay ID Hs02702785_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 22827

Gene Name:

 poly(U) binding splicing factor 60

Gene Aliases:

 FIR, RoBPI, SIAHBP1, VRJS

Location:

 Chr.8:143816344-143829386 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PUF60 NM_001136033.2 11 1388 NP_001129505.1
NM_001271096.1 10 1315 NP_001258025.1
NM_001271097.1 9 1231 NP_001258026.1
NM_001271098.1 11 1366 NP_001258027.1
NM_001271099.1 10 1282 NP_001258028.1
NM_001271100.1 10 1337 NP_001258029.1
NM_014281.4 10 1318 NP_055096.2
NM_078480.2 11 1369 NP_510965.1
XM_011516929.2 12 1568 XP_011515231.1
XM_011516930.2 11 1419 XP_011515232.1
XM_017013234.1 11 2901 XP_016868723.1
XM_017013235.1 11 1471 XP_016868724.1
XM_017013236.1 10 2850 XP_016868725.1
XM_017013237.1 12 1630 XP_016868726.1
XM_017013238.1 12 1430 XP_016868727.1
XM_017013239.1 11 1396 XP_016868728.1
XM_017013240.1 10 1345 XP_016868729.1
AF114818.1 11 1350 AAF23589.1
AF190744.1 11 1278 AAF05605.1
AF217197.2 10 1245 AAF27522.2
AK292373.1 11 1350
BC008875.2 10 1284 AAH08875.1
BC009734.1 10 1267 AAH09734.1
BC011265.1 11 1305 AAH11265.1
BC011979.1 9 1184 AAH11979.1
CR457143.1 11 1286 CAG33424.1
U51586.1 9 1232 AAB41656.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv6442 Chr.8:143781830 - 143826293 on Build GRCh38 Deletion LOC642574 PUF60 MIR937 SCRIB
nsv950014 Chr.8:143786431 - 143842128 on Build GRCh38 Deletion MIR6845 LOC642574 PUF60 NRBP2 MIR937 SCRIB
nsv612896 Chr.8:143778707 - 143874693 on Build GRCh38 Loss MIR6845 LOC642574 PUF60 EPPK1 NRBP2 MIR937 SCRIB
nsv612895 Chr.8:143719073 - 143827718 on Build GRCh38 Loss FAM83H-AS1 LOC105375800 FAM83H LOC642574 MIR4664 PUF60 MAPK15 MIR937 SCRIB
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion MIR6845 GRINA MIR6846 PUF60 EPPK1 NRBP2 EXOSC4 SPATC1 SCRIB MIR661 PARP10 PLEC LOC642574 SMPD5 MIR6847 OPLAH MIR937
nsv466009 Chr.8:143812326 - 143900795 on Build GRCh38 Loss MIR6845 PUF60 EPPK1 NRBP2 MIR937 SCRIB

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