Hs02703955_cn

• Gene Symbol: SNAI3
• Assay Reference Genome Location: Chr.16:88681480 on build GRCh38
• Cytoband: 16q24.2

Target Gene Details

• Entrez Gene ID: 333929
• Gene Name: snail family transcriptional repressor 3
• Gene Aliases: SMUC, SNAIL3, ZNF293, Zfp293
• Location: Chr.16:88677682-88686474 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SNAI3	NM_178310.3	2	379	NP_840101.1
	BC041461.1	2	286	AAH41461.1
	BC107058.2	2	379	AAI07059.1

Target Gene Details

• Entrez Gene ID: 197187
• Gene Name: SNAI3 antisense RNA 1
• Gene Aliases: -
• Location: Chr.16:88663373-88687186 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SNAI3-AS1	NR_024399.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv471113	Chr.16:88650665 - 88764428 on Build GRCh38	Loss	PIEZO1 SNAI3-AS1 RNF166 MIR4722 CTU2 LOC339059 LOC100289580 SNAI3 MVD CYBA
nsv1065973	Chr.16:88661146 - 88731220 on Build GRCh38	Loss	PIEZO1 SNAI3-AS1 RNF166 MIR4722 CTU2 LOC100289580 SNAI3 MVD
nsv833327	Chr.16:88667431 - 88757621 on Build GRCh38	Loss	PIEZO1 SNAI3-AS1 RNF166 MIR4722 CTU2 LOC339059 LOC100289580 SNAI3
nsv833325	Chr.16:88553738 - 88698194 on Build GRCh38	Loss	SNAI3-AS1 RNF166 ZC3H18-AS1 IL17C ZC3H18 SNAI3 MVD CYBA
nsv952070	Chr.16:88257295 - 88780192 on Build GRCh38	Deletion	RNF166 MIR4722 IL17C CTU2 LOC339059 LOC100289580 ZFPM1 ZNF469 LOC107984862 CYBA PIEZO1 SNAI3-AS1 ZC3H18-AS1 ZC3H18 SNAI3 MVD MIR5189
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	TCF25 TUBB3 ZNF778 CDT1 LOC100289580 PABPN1L LOC107987238 CENPBD1 SNAI3-AS1 GAS8-AS1 LOC100287036 LOC105371414 RPL13 URAHP SPATA33 LOC101927817 TRAPPC2L CBFA2T3 CDH15 RNF166 IL17C LOC400558 LOC339059 LOC100129697 TUBB8P7 CHMP1A APRT VPS9D1-AS1 PRDM7 SPIRE2 DBNDD1 GALNS ANKRD11 LINC00304 ACSF3 LOC105371409 FANCA VPS9D1 AFG3L1P MIR4722 DEF8 SPG7 CTU2 LOC105371419 PIEZO1 SPATA2L ZNF276 GAS8 CPNE7 LOC101927793 SLC22A31 FAM157C LOC107984817 SNORD68 CYBA CDK10 SNAI3 DPEP1 MVD MC1R
nsv819188	Chr.16:88672556 - 88694874 on Build GRCh38	Gain	SNAI3-AS1 SNAI3

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
copper ion binding