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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89645875 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02711355_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 6 959 NP_001076783.1
NM_002768.4 7 979 NP_002759.2
NR_046418.2 7 1147
AK302055.1
BC010000.2 2 567 AAH10000.2
BC132711.1 7 809
BC132713.1 7 809
D38554.1 7 847 BAA07557.1
U58048.1 7 1036 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss CHMP1A MC1R CDK10 DEF8 SPATA33 TCF25 AFG3L1P LOC105371419 FANCA ZNF276 VPS9D1 TUBB3 GAS8 GAS8-AS1 SPATA2L DPEP1 VPS9D1-AS1 DBNDD1 CENPBD1 SPIRE2 LOC107984817
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss MC1R FAM157C CDK10 DEF8 AFG3L1P PRDM7 FANCA LOC105371414 ZNF276 GAS8 GAS8-AS1 SPATA2L VPS9D1-AS1 CPNE7 URAHP TUBB8P7 LOC100287036 SNORD68 SPIRE2 LOC101927817 CHMP1A ZNF778 RPL13 SPATA33 TCF25 LOC105371419 ANKRD11 VPS9D1 TUBB3 DPEP1 DBNDD1 CENPBD1 SPG7 LOC107984817
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain SPATA2L CHMP1A DPEP1 CDK10 SPATA33
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain CHMP1A DPEP1 CPNE7 RPL13 SNORD68 SPG7 SPATA33 ANKRD11 LOC101927817
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CTU2 CDK10 DEF8 PRDM7 FANCA PIEZO1 CPNE7 URAHP LOC100287036 GALNS LOC339059 SNAI3-AS1 RNF166 CDH15 LOC101927793 CHMP1A RPL13 ANKRD11 VPS9D1 LOC107987238 TUBB3 CYBA LOC100129697 MVD CBFA2T3 LOC107984817 PABPN1L MC1R FAM157C SNAI3 AFG3L1P LOC100289580 IL17C LOC105371414 ZNF276 GAS8 GAS8-AS1 SPATA2L VPS9D1-AS1 TUBB8P7 SNORD68 ACSF3 SPIRE2 LOC400558 LOC101927817 CDT1 ZNF778 SPATA33 TCF25 LOC105371419 APRT MIR4722 LINC00304 DPEP1 LOC105371409 DBNDD1 TRAPPC2L CENPBD1 SPG7 SLC22A31
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion CHMP1A CDK10 RPL13 SPATA33 FANCA ZNF276 VPS9D1 SPATA2L DPEP1 VPS9D1-AS1 CPNE7 SNORD68 SPG7
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain CHMP1A DPEP1 CPNE7 RPL13 SNORD68 SPG7 SPATA33

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