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See other SPATA2L CNV Assays ›
Gene Symbol
SPATA2L
Assay Reference Genome
Location

Chr.16:89700884 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02714919_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 124044

Gene Name:

 spermatogenesis associated 2 like

Gene Aliases:

 C16orf76, tamo

Location:

 Chr.16:89696357-89701993 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA2L NM_152339.3 NP_689552.2
XM_005256279.4 XP_005256336.1
AK127372.1
BC027606.1 AAH27606.1
BC039608.1 AAH39608.1
BC053588.1 AAH53588.1
BI917028.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion ZNF276 CDK10 SPATA2L FANCA VPS9D1 VPS9D1-AS1
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain ZNF276 CDK10 LOC107984817 SPATA33 SPATA2L FANCA VPS9D1 LOC105371419 SPIRE2 VPS9D1-AS1
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss ZNF276 GAS8 SPATA33 MC1R SPATA2L FANCA VPS9D1 LOC105371419 SPIRE2 VPS9D1-AS1 GAS8-AS1 CHMP1A DPEP1 CDK10 AFG3L1P LOC107984817 TCF25 CENPBD1 DBNDD1 DEF8 TUBB3
nsv516241 Chr.16:89696002 - 89723490 on Build GRCh38 Loss ZNF276 CDK10 SPATA2L VPS9D1 VPS9D1-AS1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss LOC100287036 GAS8 SPATA33 ANKRD11 SPATA2L FANCA SPG7 LOC105371419 LOC105371414 GAS8-AS1 CPNE7 FAM157C CHMP1A AFG3L1P LOC107984817 TCF25 CENPBD1 PRDM7 DEF8 URAHP ZNF276 MC1R ZNF778 LOC101927817 VPS9D1 SPIRE2 TUBB8P7 VPS9D1-AS1 DPEP1 CDK10 SNORD68 RPL13 DBNDD1 TUBB3
nsv833330 Chr.16:89678466 - 89741783 on Build GRCh38 Loss ZNF276 CDK10 SPATA2L FANCA VPS9D1 VPS9D1-AS1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC100287036 SPATA33 ANKRD11 FANCA LOC105371414 LOC100129697 TCF25 CENPBD1 DEF8 ZNF276 CTU2 LOC100289580 LOC339059 MC1R ZNF778 LOC101927817 VPS9D1 TUBB8P7 GALNS TRAPPC2L DPEP1 SLC22A31 SNAI3-AS1 DBNDD1 GAS8 MIR4722 SPATA2L PIEZO1 SPG7 LOC105371419 LOC400558 APRT GAS8-AS1 CPNE7 FAM157C CHMP1A RNF166 AFG3L1P LOC107984817 CDT1 LOC107987238 LINC00304 PRDM7 CDH15 URAHP PABPN1L LOC105371409 CBFA2T3 MVD LOC101927793 SPIRE2 SNAI3 ACSF3 VPS9D1-AS1 CDK10 SNORD68 RPL13 CYBA IL17C TUBB3
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion ZNF276 SPATA33 SPATA2L FANCA VPS9D1 SPG7 VPS9D1-AS1 CPNE7 CHMP1A DPEP1 CDK10 SNORD68 RPL13

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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