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See other PCYT1A CNV Assays ›
Gene Symbol
PCYT1A
Assay Reference Genome
Location

Chr.3:196238747 on build GRCh38
Cytoband
3q29
Assay ID Hs02745909_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5130

Gene Name:

 phosphate cytidylyltransferase 1, choline, alpha

Gene Aliases:

 CCTA, CT, CTA, CTPCT, PCYT1, SMDCRD

Location:

 Chr.3:196237745-196287752 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCYT1A NM_001312673.1 9 1193 NP_001299602.1
NM_005017.3 10 1257 NP_005008.2
AK304534.1 9 1050
AK313450.1
BC046355.1 10 1218 AAH46355.1
L28957.1 9 1090 AAA72127.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3599278 Chr.3:196229547 - 196249176 on Build GRCh38 Gain SLC51A PCYT1A
nsv997797 Chr.3:195931489 - 196486087 on Build GRCh38 Gain RNF168 ZDHHC19 TM4SF19-TCTEX1D2 LOC105374301 TM4SF19-AS1 TCTEX1D2 UBXN7 UBXN7-AS1 SLC51A TFRC SDHAP1 PCYT1A TM4SF19 LINC00885
esv3599276 Chr.3:196227560 - 196295937 on Build GRCh38 Loss SLC51A PCYT1A TCTEX1D2
nsv1009811 Chr.3:196124925 - 196411200 on Build GRCh38 Gain SLC51A ZDHHC19 TM4SF19-TCTEX1D2 PCYT1A TM4SF19-AS1 TCTEX1D2 UBXN7 TM4SF19 LINC00885
nsv593071 Chr.3:196132016 - 196345571 on Build GRCh38 Gain SLC51A ZDHHC19 TM4SF19-TCTEX1D2 PCYT1A TM4SF19-AS1 TCTEX1D2 TM4SF19 LINC00885
nsv1008512 Chr.3:195982791 - 196248065 on Build GRCh38 Gain SLC51A TFRC ZDHHC19 SDHAP1 PCYT1A LOC105374301 LINC00885
esv2759213 Chr.3:195382058 - 196344722 on Build GRCh38 Gain+Loss LOC105374299 ZDHHC19 APOD MUC4 TM4SF19-TCTEX1D2 LOC105374301 MIR6829 LOC101929697 TM4SF19-AS1 MUC20 TCTEX1D2 LOC105374297 ACAP2 SLC51A LINC00969 TFRC SDHAP1 PCYT1A MIR570 PPP1R2 SDHAP2 TM4SF19 LINC00885 TNK2

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