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See other PRPF6 CNV Assays ›
Gene Symbol
PRPF6
Assay Reference Genome
Location

Chr.20:63983222 on build GRCh38
Cytoband
20q13.33
Assay ID Hs02749115_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 24148

Gene Name:

 pre-mRNA processing factor 6

Gene Aliases:

 ANT-1, ANT1, C20orf14, Prp6, RP60, SNRNP102, TOM, U5-102K, hPrp6

Location:

 Chr.20:63981069-64033100 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 2 - Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRPF6 NM_012469.3 NP_036601.2
XM_006723769.2 XP_006723832.1
AB019219.1 BAA37140.1
AF026031.1 AAD01798.1
AF221842.1 AAF66128.1
AK001554.1
AK225993.1
AK314310.1
BC001666.2 AAH01666.1
BI562505.1
BP366197.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv509784 Chr.20:63824382 - 63983325 on Build GRCh38 Insertion MIR647 MIR941-4 ABHD16B UCKL1-AS1 DNAJC5 ZNF512B TPD52L2 MIR941-2 SAMD10 PRPF6 MIR941-5 C20orf181 MIR941-3 ZBTB46 MIR941-1 MIR1914 UCKL1
nsv586703 Chr.20:63964886 - 64095388 on Build GRCh38 Loss LKAAEAR1 SAMD10 PRPF6 SOX18 OPRL1 MIR6813 TCEA2 LINC00176 ZNF512B RGS19
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss MIR647 LKAAEAR1 SOX18 RTEL1-TNFRSF6B TNFRSF6B ABHD16B UCKL1-AS1 ZGPAT STMN3 MYT1 MIR941-2 PRPF6 MIR941-5 LINC00266-1 C20orf181 MIR6813 ZBTB46 LIME1 NPBWR2 MIR941-1 LINC00176 ZBTB46-AS1 OPRL1 PCMTD2 MIR941-4 SLC2A4RG DNAJC5 ZNF512B ARFRP1 TPD52L2 GMEB2 SAMD10 MIR941-3 TCEA2 LOC100505771 MIR1914 RTEL1 UCKL1 RGS19
nsv469773 Chr.20:63845428 - 64039312 on Build GRCh38 Gain MIR647 MIR941-4 ABHD16B UCKL1-AS1 DNAJC5 ZNF512B TPD52L2 MIR941-2 SAMD10 PRPF6 MIR941-5 C20orf181 MIR941-3 MIR941-1 MIR1914 LINC00176 UCKL1
nsv1160691 Chr.20:63943650 - 64055199 on Build GRCh38 Deletion SAMD10 PRPF6 SOX18 UCKL1-AS1 TCEA2 LINC00176 ZNF512B UCKL1

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