Hs02753470_cn

• Gene Symbol: NELFB
• Assay Reference Genome Location: Chr.9:137256852 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 25920
• Gene Name: negative elongation factor complex member B
• Gene Aliases: COBRA1, NELF-B
• Location: Chr.9:137255300-137273548 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NELFB	NM_015456.4			NP_056271.3
	AF464935.1			AAL69965.1
	AK022651.1			BAB14157.1
	AK091056.1
	BC011892.1			AAH11892.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv13009n54	Chr.9:137173890 - 137327859 on Build GRCh38	Loss	STPG3 TPRN C9orf173-AS1 FAM166A SSNA1 EXD3 NDOR1 SLC34A3 NRARP RNF224 NELFB RNF208 TOR4A TMEM203 ANAPC2 CYSRT1 TUBB4B
dgv13011n54	Chr.9:137223996 - 137338927 on Build GRCh38	Loss	NELFB STPG3 TOR4A C9orf173-AS1 FAM166A EXD3 SLC34A3 NRARP RNF224 CYSRT1 TUBB4B
nsv524322	Chr.9:136795692 - 137482216 on Build GRCh38	Loss	MIR3621 FUT7 SSNA1 NDOR1 PRR31 NELFB TOR4A PHPT1 ENTPD8 CLIC3 TMEM210 GRIN1 SLC34A3 NRARP LRRC26 MIR7114 ABCA2 C8G MIR4292 C9orf142 LOC101930307 MAN1B1-AS1 LCNL1 DPP7 MIR4479 RNF224 CCDC183-AS1 TRAF2 PNPLA7 CCDC183 RNF208 NPDC1 LCN12 NSMF RABL6 NOXA1 STPG3 TPRN C9orf173-AS1 FAM166A SAPCD2 C9orf172 EXD3 MAMDC4 MAN1B1 FBXW5 C9orf139 UAP1L1 TMEM203 ANAPC2 PTGDS CYSRT1 ENTPD2 TUBB4B EDF1
nsv951207	Chr.9:137136949 - 137379148 on Build GRCh38	Deletion	TMEM210 STPG3 MIR3621 GRIN1 TPRN C9orf173-AS1 FAM166A SSNA1 EXD3 NDOR1 SLC34A3 NRARP RNF224 LRRC26 NELFB RNF208 TOR4A TMEM203 ANAPC2 CYSRT1 TUBB4B
nsv1161918	Chr.9:137118319 - 137438026 on Build GRCh38	Duplication	TMEM210 STPG3 MIR3621 GRIN1 TPRN C9orf173-AS1 FAM166A SSNA1 EXD3 NDOR1 SLC34A3 NRARP RNF224 LRRC26 NELFB RNF208 TOR4A ENTPD8 TMEM203 ANAPC2 CYSRT1 TUBB4B NOXA1
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	MIR3621 FUT7 SSNA1 NDOR1 LCN15 PRR31 LINC01451 NELFB LCN8 TOR4A PHPT1 SNORA17B CLIC3 TMEM210 GRIN1 SLC34A3 NRARP LRRC26 ABCA2 C8G MIR4292 C9orf142 LOC101930307 MIR6722 EGFL7 LOC100128593 HSPC324 MAN1B1-AS1 LCN10 LCNL1 DPP7 MIR4479 LCN6 RNF224 CCDC183-AS1 TRAF2 AGPAT2 CCDC183 RNF208 NPDC1 LCN12 FAM69B RABL6 STPG3 MIR126 TPRN C9orf173-AS1 SNHG7 FAM166A SAPCD2 C9orf172 EXD3 MAMDC4 MAN1B1 TMEM141 FBXW5 SNORA17A C9orf139 UAP1L1 TMEM203 ANAPC2 PTGDS CYSRT1 ENTPD2 TUBB4B EDF1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
transcription elongation from RNA polymerase II promoter
negative regulation of transcription elongation from RNA polymerase II promoter
positive regulation of viral transcription

Function(s)

protein binding